| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3532 |
|---|
| Symbol | |
|---|
| ID | 5735391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4446258 |
|---|
| End bp | 4447502 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641280679 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_001546296 |
|---|
| Protein GI | 159900049 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000268669 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCAC ACAACGACCT CGGGTTGGTA TACTGGGTGG TGACGAAACC AAACCCATCC
CAAAACCGAG GTCGTATGCC GAGTATACCA GCCCTTGCCC ACTGGATCAA CACCATCCTG
CGCACCGCCG TGCCCACCCT CTCGCCCTGG ACTGCCCGTC GGCTCACCGA TTGGCTCGTC
AGCATCCTGC TCATGCCGTC CATCACCACG CGCGTCGTGG CCTGGGGCTG TGCCCTTGGA
CTGTCCACCG CTGCCCACGC CGCCAGTCAC GAACGCCGAC TGCGCCGCAC CTATCGGGAT
TCCCAGCTGT CGTGGTCGCT CCATCGCGCC ATCCTCGCCA CCACCCTCCA CATCGCACCC
ACTGAATCCG TCACCGTCAT CATCGATGAA ACCACCCACA CCGACCGCTG GACCCTGCTC
ACCGCCGCCC TCTGGTATCA CGGTCGCGCC ATTCCGCTTG CCTGGGTGCT CCATCCCGGC
TATACCCGCC GCGCCACCGC CTTCTGGACC GATGTTGCCA CCCTGCTGGA GCGCGTGCAG
CAGGTGCTGC CCAATGCCAT GTCCGTCGTC GTCGTGGCCG ACCGTGCTTT TGGCTGCCCC
GCCTTCACCG ATCAGGTCGC GGCCTACGGC TGGGGCTGGG TCGTGCGCGT CCAAGGCCAT
ACCCGCATCC AACTGCGGGG GCACACCGAA ACCATGATCC GCACGCTGGT CACGCGAGGC
CATCGCGTGG TGCGGCGGGG CCATGCCTTC AAGAAGGCGG GCTGGCGAAC GGTGACAGTG
GTGGCCGCAT GGGAGGCGAC GTGTCACGAG CCGTTACTGC TGGTGAGCAA TCTGGAGGGC
ATTGGGGCGA TTCGGCAGGC GTATGGGCGG CGCTCTGCGA TTGAGGCCCT GTTTCGCGAT
TGGAAAACGG CGGGCTGGCA ATGGGAGGCG AGCCAGTCGC GGAGCCAGAC GACGCAGGAG
GCCTTGGTGC TGGGCATGGC GATCGCGACG GTGCTGGTGC TGCTGGTCGG GACGGCGGAG
GCGCAGGCGG TGCTGGCCGA ACGCGGGGAT CGCCCCAGCC CGCGCCGCCC ATGGGCGGCA
CGAGAAAGTC TGTTTCGGTT GGGGCGGTAT GGGGTGCTGC GCTGGCTGTG GACGGGAACG
CAGCCAGCGC TGGGAGCGCG ACTATCGTTG GCGGGAACGG CGCTGCACGA ACGGTGGGCC
ACGACGGTGA CGCGGGGTGG TCGGCTCGGG ACGGCCATCC CCTAA
|
|---|
| Protein sequence | MGSHNDLGLV YWVVTKPNPS QNRGRMPSIP ALAHWINTIL RTAVPTLSPW TARRLTDWLV
SILLMPSITT RVVAWGCALG LSTAAHAASH ERRLRRTYRD SQLSWSLHRA ILATTLHIAP
TESVTVIIDE TTHTDRWTLL TAALWYHGRA IPLAWVLHPG YTRRATAFWT DVATLLERVQ
QVLPNAMSVV VVADRAFGCP AFTDQVAAYG WGWVVRVQGH TRIQLRGHTE TMIRTLVTRG
HRVVRRGHAF KKAGWRTVTV VAAWEATCHE PLLLVSNLEG IGAIRQAYGR RSAIEALFRD
WKTAGWQWEA SQSRSQTTQE ALVLGMAIAT VLVLLVGTAE AQAVLAERGD RPSPRRPWAA
RESLFRLGRY GVLRWLWTGT QPALGARLSL AGTALHERWA TTVTRGGRLG TAIP
|
|---|
| |