| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3527 |
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| Symbol | |
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| ID | 5735388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4439236 |
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| End bp | 4441239 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280674 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001546291 |
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| Protein GI | 159900044 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAAG ACCCGCCTTC ATCTGTCGAT TTAGCTGCTC GGCTGGCTCA GCTTGAACGT
GAAAATCGTA TTTTACAGGC CATGCTCGAC ACGGTGCCTG ATGCGATTGT GTTTAAAAAT
GCTGATCTCA CGATTGAGTA TGCCAATCGC GCTTTTCGCG AATGGTTTGG CTTGCCGCTT
GAGCAGTTTC ATGTAGCCGA TGATCGTTCG GGCGATGATG CCTATGCCTC AGAATATCAA
AGCCACGATC GCCAAGTCTT ACGTAGTGGC CTTGGTAGCG AGTTTGAGGA GCGCTCAAAT
GCGCCCGATG GCTCGTTGAT TACCACCCGT AGCATCAAAC AACCAGTGCG TGATGCTAAC
CAAGTCATTG GCTTGGTGGC AGTGTTGCGC GATGTAACCA GTGCGGCCCA AGCTTCGCGC
TCACTGACGG AAACCCAAGC CCGACTTTCG CGGATTATCT CGAATGTGCC TGGCATGGTT
TTTCAGTTTG TGCTGCATCC CGATGGCACA AGCGAGTTTC CCTATGTGAG CGAGGGCATT
CGCCAAGCCT TTGGCATCGA GCCAGAACGC CTGACTTCGG AGCGCGATGC TCTCTATAAC
TGGGTGCATC CCGAAGATCA GCCAGAATTT ATCCGTTCGT TTGTTGAATC GGGCCAGTTG
CTCGAACCTT GGCAATGGGA AGGCCGTGTG GTCTACGATG GTGTTGTGCG CTGGGTACGC
GGTGCTTCGC GGCCAACTCG CACCGAGGCT GGTGATATTT TGTGGGATGG CGTGTTGATG
GATATTACCT TGCAACGCGA AAATGAAGCT GCGTTGCGCC GTCTGCAAAA TCGTTTGCAA
CAGTTTCTTG ATGCGACTCC CGTTGGTTTG TATGTGGTCG AGCCTGATGG CAAGCCCTAT
TATGCCAATG CCAAAGCCCA AGAGTTGCTC GGCCAACATG TGATGCTGCC AGTCAGCCAG
CAAACCGAGA CCTATCGCAC CTACAAAATT GGCAGTGAAA CGCTCTATCC GCGCGAAGAA
TTGCCAACCC AACGCGCCCT CAAGGGCGAA ATGGTGCACC TTGATGATCT TGAATTTCGC
TATGCCGATA AGCCTGCAAC TGCAATTGAG GTTTATGCCC GCCCGATTTA CGACCCCAAT
GATCAAATTG AATATGCCAT CGCCACCTTT TTCGATATTA CCGAGCGCCG CCAAATTGCC
CAAGAATTGT TTGATTGGCG GCAACGCTTC GATCTGATCA TGTCAACCGT CGAGTTGGTG
ATGTACGATT ACGATGTGAC CAACAATAAA ATTGAATGGA GCGATTCGGT CACCAAGATT
TTGGGCTATC CCAAGGCCGA ATTTAGCCTG AGCCTTGATG CATGGGCTGC TGGTTTACAC
CCCGACGATG CCCCCGAAGC CTTGCGCTTG CTCGAAATTG CCCAAGAAAA TTGCAGTACC
TATGCGGTTG AATATCGCTT TTTACATCAT TCTGGTCATT GGCTCTGGCT CTTAGATCGT
GGGTTCTTTA TTCCAAACAA CGATGGTGTG GCAATTCGCA TGTTGGGCTT GGTGCAAGAT
ATTACTGAAC GCAAACAAGC TGAAGTGATG CGCGAACAAA TGCAGGGCCA AATTATCGAA
GCTCAAGCTG CCGCGCTCCG CGAACTTTCC ACGCCATTAA TCCCAATCAA CGATCGCACG
GTGATTATGC CACTGATTGG CTCGATTGAT TCAGCACGCG CGACCCAAAT TGTCGAATCG
CTGCTGCAAG GTGTGAGCCA AATGAACGCT GGCGTGGTGA TTCTCGACTT AACTGGGGTT
CCAGTCGTCG ATACCCAAGT TGCTAGTGCT TTGTTGCAGG CGGCGCGGGC CGTGCGTTTG
CTGGGCGCTG AGGTGGTATT AACCGGAATT CGCCCAGAAA TTGCTCAAAC CTTGGTTAGC
TTGGGCATTA GTTTGGGCGA TGTTGTGACC TTGAGCAATT TACAAAGCGG GATCGAACGC
GCCTTGAATC GCCGTTTATC CTAA
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| Protein sequence | MAQDPPSSVD LAARLAQLER ENRILQAMLD TVPDAIVFKN ADLTIEYANR AFREWFGLPL
EQFHVADDRS GDDAYASEYQ SHDRQVLRSG LGSEFEERSN APDGSLITTR SIKQPVRDAN
QVIGLVAVLR DVTSAAQASR SLTETQARLS RIISNVPGMV FQFVLHPDGT SEFPYVSEGI
RQAFGIEPER LTSERDALYN WVHPEDQPEF IRSFVESGQL LEPWQWEGRV VYDGVVRWVR
GASRPTRTEA GDILWDGVLM DITLQRENEA ALRRLQNRLQ QFLDATPVGL YVVEPDGKPY
YANAKAQELL GQHVMLPVSQ QTETYRTYKI GSETLYPREE LPTQRALKGE MVHLDDLEFR
YADKPATAIE VYARPIYDPN DQIEYAIATF FDITERRQIA QELFDWRQRF DLIMSTVELV
MYDYDVTNNK IEWSDSVTKI LGYPKAEFSL SLDAWAAGLH PDDAPEALRL LEIAQENCST
YAVEYRFLHH SGHWLWLLDR GFFIPNNDGV AIRMLGLVQD ITERKQAEVM REQMQGQIIE
AQAAALRELS TPLIPINDRT VIMPLIGSID SARATQIVES LLQGVSQMNA GVVILDLTGV
PVVDTQVASA LLQAARAVRL LGAEVVLTGI RPEIAQTLVS LGISLGDVVT LSNLQSGIER
ALNRRLS
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