| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3513 |
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| Symbol | |
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| ID | 5735374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4423509 |
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| End bp | 4424369 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280660 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001546277 |
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| Protein GI | 159900030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATC CCTATTCAGG CTATCAACCT GAGCGTGTTG AATATTCGCC CAGCCAACCT
GTGATGGTGC AACTGCCCAA TGCACCAGTA CGGGCTACTT GGGTGTTTAT GGCGATCAAC
GTCGTTATGT TTGTGATCTG TATTCTTCAG GGCATGAGTG TGATGGGCAA TACCGAAGGC
GATGCCTTTG TCTTGATCGA ACTTGGAGCC AAGTGGTCGC CTTTGATGGA TATCGGCGGC
GAATGGTGGC GCTTATTCAC GGCGACCGTG CTGCACGGCG GGATTGTGCA TATTGGCTTT
AATATGTATG CCCTGTATGC GCTTGGCCCA ACCGTTGAGC GCTTCTATGG TAGCCTGCGG
TTTAGCGTGA TCTACCTGAT TGCGGGGATT GGCGGGGCTT GGGCTTCGTA TAGTTTTGGC
AGTTTGACTG GCCCTTCAAT TGGCGCATCG GGGGCAATCT TCGGCCTGAT TGGCTGCTTG
ATTGGCTTTT TCCTTTCGGC TCGCAGTGTC TTGGGTGATT TTGCTCGCCA AAACTTGCGC
CAAATGGTCG GTACAGCCGC GATTAACTTG ATCATTGGCT TATCGTTTTC GTCGGTGATC
GACAATTATG CTCACATTGG CGGGATGCTG ATGGGCTTGG CGGTGGGCTA TGGTTTGGCT
CCACGCTTAG TCTATATTGC CGATTGGTTT AAGCCGCGGA TTGAGGCTAA AGCACCATCA
GCATTGCTCT GGCTGAGCGT GGTTGGCGCG ATTGGCTTTA TTCTGGTTGC GACGTGGTTT
GTGCATAACC AACGCATGAA CGATGCTACA AGCGTTGCGC TCTTAGAAGA ACTTTATCAA
GCTTGGTTAA ATGCCCGTTA G
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| Protein sequence | MQDPYSGYQP ERVEYSPSQP VMVQLPNAPV RATWVFMAIN VVMFVICILQ GMSVMGNTEG
DAFVLIELGA KWSPLMDIGG EWWRLFTATV LHGGIVHIGF NMYALYALGP TVERFYGSLR
FSVIYLIAGI GGAWASYSFG SLTGPSIGAS GAIFGLIGCL IGFFLSARSV LGDFARQNLR
QMVGTAAINL IIGLSFSSVI DNYAHIGGML MGLAVGYGLA PRLVYIADWF KPRIEAKAPS
ALLWLSVVGA IGFILVATWF VHNQRMNDAT SVALLEELYQ AWLNAR
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