Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3506 |
Symbol | |
ID | 5735367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4415445 |
End bp | 4416530 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280653 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001546270 |
Protein GI | 159900023 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.109153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAC GGCGGGTTGG AATTGTTTTT GGCGGGAAAT CGGGCGAGCA CGAAGTGTCG TTGAAATCGG CGCGGGCCGT GATGAATGCG CTTGATCCTG AAAAATATAC CGTGATTCCG ATTGGAATCA CCCGTAATGG CCAATGGCTC AGCGGCGGTG ATCCGTTGTT GGCCTTGGAG CAACAGGCCG ACCAAAAGAT GCTTGGCCGT ACACCGCAAG CTGGTGTCGT CAGCGAAACA GCGATTGTGC AAAGTGCTGG CAGTTTGCCC GAACAAACCA ACGTTGCGGC TTTGGATGTG ATTATTCCAG TCTTGCATGG CCCATTTGGC GAGGATGGCA CGATTCAAGG GGTGTTTGAG TTCGCCAATC TGCCCTATGT TGGCTGTGGA GTTTTGGCGG CTTCAGTTGG GATGGATAAA GGCTTGATGA AATCGGCTTT TGCCGCCGCT GGTTTGCCCC AAGTGCCCTG GCAGTTGGTT TTGCGCCGTG ATTGGCAAAC CCAGCCCGAA GCTGTCTACG AGCGGCTTGA GGCTACGTTG CACTATCCAA TGTTTGTTAA GCCCGCCAAC TTAGGTAGCA GCGTTGGTAT TAGCAAAGTC AGCAATCGAG CTGAATTGGC GACTGGCATG GCCGAGGCCG CTGGTTATGA TCGGCGAATT GTAGTCGAGC AAGGCATCAA TGCCCGTGAA ATTGAAGTCG CAATTTTGGG CAACGACGAT CCCAAGCCCT CAGTGCCAGG CGAAGTGCTG CCTGCCAACG ATTTTTACGA CTATGCCGAT AAATACCTTG AAGGCCAAAC CCAATTTGCA ATTCCGGCGG AGCTTGATGC TGCGACCAGC GAACAGCTGC GCGAGATGGC AGTTACCGCC TTCAAAGCGA TTGACGGGGC TGGCTTGGCG CGGGTCGATT TCTTTGTCGA GCGCGAAACT GGCGCGATCT ATATCAACGA AATTAATACC TTCCCTGGCT TTACGGCGAT GAGCCAATAT CCCAAATTGT GGGAAGCTAC GGGCCTTGGC TATAGCGAAT TACTCGATCG GCTGATCGAT TTGGCGATTG AGCGTTATCA CGAGCGAGGC CGATGA
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Protein sequence | MTKRRVGIVF GGKSGEHEVS LKSARAVMNA LDPEKYTVIP IGITRNGQWL SGGDPLLALE QQADQKMLGR TPQAGVVSET AIVQSAGSLP EQTNVAALDV IIPVLHGPFG EDGTIQGVFE FANLPYVGCG VLAASVGMDK GLMKSAFAAA GLPQVPWQLV LRRDWQTQPE AVYERLEATL HYPMFVKPAN LGSSVGISKV SNRAELATGM AEAAGYDRRI VVEQGINARE IEVAILGNDD PKPSVPGEVL PANDFYDYAD KYLEGQTQFA IPAELDAATS EQLREMAVTA FKAIDGAGLA RVDFFVERET GAIYINEINT FPGFTAMSQY PKLWEATGLG YSELLDRLID LAIERYHERG R
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