Gene Haur_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3497 
Symbol 
ID5735358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4404838 
End bp4405827 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID641280644 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001546261 
Protein GI159900014 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTT CCAACAGTAC CAGTGAGAAT TTGCTTGAGG TTCGTAATCT CAAGAAATAT 
TTTCCAATTA AGGGTGGTTT GATGCGCCGC ACCGTCGCCC AAGTTAAGGC GCTCGATGGG
GTGAGTTTTA GCATCAAGAA GGGCGAAACC CTTGGCTTGG TCGGTGAATC GGGCTGTGGC
AAAACTACGA CGGGCCGCAC AGTCTTGCGC CTGATCCCAC CATCGGGTGG TGAGGTGCTG
TTTGAAGGCC AAGATGTGCT CAAGGCAAGC TCTAGCCGCA TGCGAACCTT GCGCCGTGAT
ATGCAAATTG TGTTTCAAGA CCCTTATGCC TCGCTTAACC CACGGATTCC AGTGGGCCAA
AGTATTGCCG AAGGTTTGAC GATTCACAAT ATTGGTACGC CCAAAGAGCG ACTTGACCAA
GTTGCCCAGG TGCTGGATCG GGTGGGCCTT AATTCCGGTC ACATGCGCCG CTTCCCGCAC
GAGTTTTCGG GTGGCCAACG CCAACGGATC GGGATTGCCC GTGCTTTGGT GATGCAGCCC
AAGCTGATCG TCTGCGATGA GCCAGTTTCA GCTTTGGACG TGTCGATTCA AGCCCAAGTG
CTCAACCTGT TGAACGACTT GCAAAAAGAT TTGGGCCTGA CCTACCTGTT TATTGCCCAC
AACTTGAGTG TTGTTGAGCA TATCAGCAAT CGGGTCGGTG TGATGTATCT CGGTCGTATG
GTCGAACTCG CAAGTCGCGA TCAACTCTTC CGCAAACCAA TGCATCCCTA TACCAAAGCC
TTGATGTCGG CAATTCCCTT GCCTGACCCA ACTATCAAGC GCGACCGGAT TATTTTGGAA
GGCGATGTGC CTAGTCCAGT TAATCCACCA AGTGGCTGCC GCTTCCACCC GCGCTGCTGG
CTGGCCCAAG ATATTTGTAA ACACGATGAC CCAATCTTTG AGGAAAAAGA GCCAGGCCAT
TTTGTGGCAT GTCACTTTGC TCAAGGTTAA
 
Protein sequence
MTVSNSTSEN LLEVRNLKKY FPIKGGLMRR TVAQVKALDG VSFSIKKGET LGLVGESGCG 
KTTTGRTVLR LIPPSGGEVL FEGQDVLKAS SSRMRTLRRD MQIVFQDPYA SLNPRIPVGQ
SIAEGLTIHN IGTPKERLDQ VAQVLDRVGL NSGHMRRFPH EFSGGQRQRI GIARALVMQP
KLIVCDEPVS ALDVSIQAQV LNLLNDLQKD LGLTYLFIAH NLSVVEHISN RVGVMYLGRM
VELASRDQLF RKPMHPYTKA LMSAIPLPDP TIKRDRIILE GDVPSPVNPP SGCRFHPRCW
LAQDICKHDD PIFEEKEPGH FVACHFAQG