Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3497 |
Symbol | |
ID | 5735358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4404838 |
End bp | 4405827 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641280644 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001546261 |
Protein GI | 159900014 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTT CCAACAGTAC CAGTGAGAAT TTGCTTGAGG TTCGTAATCT CAAGAAATAT TTTCCAATTA AGGGTGGTTT GATGCGCCGC ACCGTCGCCC AAGTTAAGGC GCTCGATGGG GTGAGTTTTA GCATCAAGAA GGGCGAAACC CTTGGCTTGG TCGGTGAATC GGGCTGTGGC AAAACTACGA CGGGCCGCAC AGTCTTGCGC CTGATCCCAC CATCGGGTGG TGAGGTGCTG TTTGAAGGCC AAGATGTGCT CAAGGCAAGC TCTAGCCGCA TGCGAACCTT GCGCCGTGAT ATGCAAATTG TGTTTCAAGA CCCTTATGCC TCGCTTAACC CACGGATTCC AGTGGGCCAA AGTATTGCCG AAGGTTTGAC GATTCACAAT ATTGGTACGC CCAAAGAGCG ACTTGACCAA GTTGCCCAGG TGCTGGATCG GGTGGGCCTT AATTCCGGTC ACATGCGCCG CTTCCCGCAC GAGTTTTCGG GTGGCCAACG CCAACGGATC GGGATTGCCC GTGCTTTGGT GATGCAGCCC AAGCTGATCG TCTGCGATGA GCCAGTTTCA GCTTTGGACG TGTCGATTCA AGCCCAAGTG CTCAACCTGT TGAACGACTT GCAAAAAGAT TTGGGCCTGA CCTACCTGTT TATTGCCCAC AACTTGAGTG TTGTTGAGCA TATCAGCAAT CGGGTCGGTG TGATGTATCT CGGTCGTATG GTCGAACTCG CAAGTCGCGA TCAACTCTTC CGCAAACCAA TGCATCCCTA TACCAAAGCC TTGATGTCGG CAATTCCCTT GCCTGACCCA ACTATCAAGC GCGACCGGAT TATTTTGGAA GGCGATGTGC CTAGTCCAGT TAATCCACCA AGTGGCTGCC GCTTCCACCC GCGCTGCTGG CTGGCCCAAG ATATTTGTAA ACACGATGAC CCAATCTTTG AGGAAAAAGA GCCAGGCCAT TTTGTGGCAT GTCACTTTGC TCAAGGTTAA
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Protein sequence | MTVSNSTSEN LLEVRNLKKY FPIKGGLMRR TVAQVKALDG VSFSIKKGET LGLVGESGCG KTTTGRTVLR LIPPSGGEVL FEGQDVLKAS SSRMRTLRRD MQIVFQDPYA SLNPRIPVGQ SIAEGLTIHN IGTPKERLDQ VAQVLDRVGL NSGHMRRFPH EFSGGQRQRI GIARALVMQP KLIVCDEPVS ALDVSIQAQV LNLLNDLQKD LGLTYLFIAH NLSVVEHISN RVGVMYLGRM VELASRDQLF RKPMHPYTKA LMSAIPLPDP TIKRDRIILE GDVPSPVNPP SGCRFHPRCW LAQDICKHDD PIFEEKEPGH FVACHFAQG
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