Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3453 |
Symbol | |
ID | 5735314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4341937 |
End bp | 4343667 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641280600 |
Product | succinate dehydrogenase |
Protein accession | YP_001546217 |
Protein GI | 159899970 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCAGC GTTATACAAC TGATGTTTTG GTGATTGGCA CAGGTGGGGC AGGCTTACGC GCAGCGATCG AACTGCATGA TCAAGGCTTG CAGGTCTTGT TGGTGGGCAA ACGTCCTAAG ACCGATGCGC ATACGGTGTT GGCGGCTGGC GGCATCAACG CAGCCCTAGC GACGGTCGAT GTTGACGATA CTTGGGCGAT TCACGCCGCC GACACCTTGC AAGAAGGTCG CATGCTGGGC GACCCGCGCA TGGTCGAATT GCTCTGTCAA CAAGCCCCCA AAGCGATTGC TGAACTTGAG GCTTGGGGCA TGCCCTTTGC CCGAACTAGT TCAGGATTGA TCGATCAGCG CTATTTTGGG GCGCATCGCT ATCGCCGCAC CTGTTTTGTC GGTGATTACA CTGGGCTTGA AATTATCAAA GCCTTGATCC GTGAAGTTGA GCGCCGCCAA ATTCCGATTC TCGAACGCGC CTATATCAGC GATTTGCTGC ATACTGGCAA TCGGGTCAAT GGCGCATACG GCTTTTGGCT AGCCGATCAA CGTGAGTTTG TGATCGAAAG CAAAGCCGTG ATTTTGGCGA CGGGCGGCCA TATTCATAGC TATCAGCGTT CCTCGTCGCG GCGGCGCGAA AATACTGGCG ATGGTATGGC CTTGGGCTTG CAAGTCGGTG CATACTTGGC CGATATGGAG CTGGTGCAAT TCCACCCATC GGGCATGATC TTCCCGCATG AATTGGCTGG AACCTTGGTG ACTGAAGCGG TGCGTGGCGA GGGCGGGCGA CTGTACAATC GCCATGGTGA ACGTTTTATG CAGCACTACG ACCCTGAACG CATGGAATTA TCGACCCGTG ATCGGGTGGC TTTAGCCAAT TACACCGAAA TTATTGAAGG CCGTGGTACT GAGCATGGCG GGGTTTGGCT CGATATTAGT CATATTCCAG CAAGCTTAAT CCACGAGCGC TTGCCACGCA TGGTTGAGCA ATTTCAGGCG GTTGGGGTGG ATATTACTCG CGAAGCCATG CAAATTGCGC CAACTGCCCA TTATTCGATG GGTGGCTTGC AGGTCGATCC CTTCAGCCAT GCCACCAATG TGGCTGGGTT ATATGCGGCA GGCGAGGTTA CGGCTGGCGT GCACGGGGCC AATCGGCTAG GTGGCAATAG TTTGGCCGAA ATTCTGGTGT TTGGGCGGAT TGCTGGCCAG CATGCTGGCG AATATGTGCG CCAACACAGC GAACAAAGCC TGCATGAAAC CCAAATGCAA GCCGCCGCTG AGCGTTTGGC TTGGGCCAGC CAACAATCAG GAGCCGTCCA ACGCAGCTTA ATCGACCAAT TGCAACAGCT GGTTTGGCAT GGCGCTGGCG TGGTACGCAA CGAACAAACG CTCGAAGCCA GCCTTGATCA ACTGCATACG CTGCGCTTTC AAGCTCAACA ACACTCGGTT GGCACAGCCG ATATCGCTGC AACTTTAGAT TTACAATCGA TGTTATTGAC TGCAGAAGCC ACAATTTTAG CGGCCTTGAT GCGCCCCGAA AGCCGTGGTG CGCATCAACG TAGCGATTAC CCCGCGACTG ATCCGCTCTG GCAGCGCACA ATCGTGATTA AGCCCTATCG TGATGAACAC GAACGCTTGC GGCTGCAACT GGATACCCAA TTAATTCCCA CTGCCAGCGA GCAAGTGCAA GCGGCCTTCA ATTATCAAGA ATATAGTATG GCTGGACGTT TGGTTGAATA G
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Protein sequence | MRQRYTTDVL VIGTGGAGLR AAIELHDQGL QVLLVGKRPK TDAHTVLAAG GINAALATVD VDDTWAIHAA DTLQEGRMLG DPRMVELLCQ QAPKAIAELE AWGMPFARTS SGLIDQRYFG AHRYRRTCFV GDYTGLEIIK ALIREVERRQ IPILERAYIS DLLHTGNRVN GAYGFWLADQ REFVIESKAV ILATGGHIHS YQRSSSRRRE NTGDGMALGL QVGAYLADME LVQFHPSGMI FPHELAGTLV TEAVRGEGGR LYNRHGERFM QHYDPERMEL STRDRVALAN YTEIIEGRGT EHGGVWLDIS HIPASLIHER LPRMVEQFQA VGVDITREAM QIAPTAHYSM GGLQVDPFSH ATNVAGLYAA GEVTAGVHGA NRLGGNSLAE ILVFGRIAGQ HAGEYVRQHS EQSLHETQMQ AAAERLAWAS QQSGAVQRSL IDQLQQLVWH GAGVVRNEQT LEASLDQLHT LRFQAQQHSV GTADIAATLD LQSMLLTAEA TILAALMRPE SRGAHQRSDY PATDPLWQRT IVIKPYRDEH ERLRLQLDTQ LIPTASEQVQ AAFNYQEYSM AGRLVE
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