Gene Haur_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3447 
Symbol 
ID5735308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4335963 
End bp4336664 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content53% 
IMG OID641280594 
Producthypothetical protein 
Protein accessionYP_001546211 
Protein GI159899964 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAACC GCCTACAACC ACGTAAATTG CTTAAGCTGG GCTTACGCTT GGCATTGCTG 
GCAATTTTAG GTCTGTTGCT GGTCAATGGT TGGGTGCGCT GGGCAACCGC CGATTATCGT 
TTTGCTGATG TGGCCAGCAT TCCAAGCCAA CCAGTTGCAA TCGTGTTTGG GGCTGGTATT 
CGCTACAATC AACCAAGCGC CGCCCTGCGT GAGCGGCTAG ATGGCGCAAT TCAGCTCTAT 
CAAGCAGGCC GCGTCCAGCA TTTGCTCATG AGCGGCGATA ATAGCCAAAC CAACTACGAT 
GAAGTAAGCG TGATGCGTGA TTATGCGATC GCCCACGGCA TACCAGCCAG CGCCATCACC 
CGTGATTATG CTGGCTTCAG CACCTACGAA ACTTGTTACC GCGCCAAAGC CATTTTCGGC 
GTAAATCAAG CAATTCTCGT CACTCAAGAT TACCATCTCC CTCGAGCAAT TTATACGTGT 
CGTGAATTGG GCGTGGCCGC GATTGGCCTG AGCATCCCCG ATTGGAATTT CAAGCCCGAG 
CAAAGCACAA CCTATTATCC GCCAGCAACC CAAATTCGCT ACACCACCCG CGAATGGCTG 
GCCCGTTGCA AAGCCCTGTT TGAGGTTCAC ATCAGCCAGC CGCAACCAAC CTTTTTAGGG 
CCAGCTGTCG GCTTAGGCGA AATCGCCAGC ACCCAAAAGT GA
 
Protein sequence
MSNRLQPRKL LKLGLRLALL AILGLLLVNG WVRWATADYR FADVASIPSQ PVAIVFGAGI 
RYNQPSAALR ERLDGAIQLY QAGRVQHLLM SGDNSQTNYD EVSVMRDYAI AHGIPASAIT 
RDYAGFSTYE TCYRAKAIFG VNQAILVTQD YHLPRAIYTC RELGVAAIGL SIPDWNFKPE 
QSTTYYPPAT QIRYTTREWL ARCKALFEVH ISQPQPTFLG PAVGLGEIAS TQK