| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3441 |
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| Symbol | trmE |
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| ID | 5735302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4328544 |
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| End bp | 4329908 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641280588 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001546205 |
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| Protein GI | 159899958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTATG CTGATACGAT CGCTGCGTTG GCTACCCCAC CTGGCGTTGG TGGGGTTGGA
ATTATTCGGG TCAGCGGCCC TCAAAGCTTA GCTATCGCCC AAGCCTTGAT CAAACCGCGC
CGCAAAGGCG TTTGGCGCTC CTACCAAATG CGCTATGGCC ATGTGCTCGA TGAGCATGGA
CAAATTGTCG ATGAGGTGTT GGCGGTCTTT TTTAAGGGGC CACGCTCATT CACCGGCGAA
GATATTTTGG AGATTCACTG CCACGGCGGC CCGCTGCCCT TGCGCCGAAC CCTGACCTTG
GCTCTAGCTC ATGGCGCTCG CTTAGCCAAC CCAGGCGAAT TTAGCTTACG CGCTTTTGCC
AATGGCCGCA TCGATTTAGT CCAAGCTGAG GCAACTCTCG ATGTGATCGA AGCCCAAACC
AACTTGGGGC TTAGCTTGGC GCTCGATCAG CTGGGCGGCG GGCTTTCGCG TGATCTGCGC
ACATTGCGCG AGCAGCTGAT GTATCCCTTG GCCTATGTCA CAGCCCTCAC CGATTTTCCC
GAAGATGATG TGCCCAGCGA GGAATTACAA CAGCCCTTGC AGCAAGCCCA AAGCCTGCTC
AGCCAACTGC TAGCTGGGGC CGATCAAGGT GTGGTTGTGC GCGAAGGGGC ACGCGCTGCC
TTGGTTGGTC GGCCCAACGC TGGCAAATCG AGCTTGATGA ATGCCCTGTT GCGCACCGAA
CGAGCCATCG TCACCGCCAT TCCCGGCACA ACCCGCGATA CCTTGGAAGA AACCGCCAAT
CTGGGCGGAA TTCCAGTGGT GCTGATTGAT ACTGCGGGGA TTACTGAAAC CGATGATGTA
GTCGAACGAA TTGGAGTCGA ACGCTCACGC GCCGCTCTCA GCAAAGCCGA TTTAGTGTTG
CTGTTGATCG ATGGTTCGCA GCCGTTAAGC CCAGAAGATT TGGCAATTGC CCAATTAACT
CATGAACGAC CCACAATCGT GATTGCTACC AAAGCCGATT TAGGCCAACA CGCTGATTTA
ACCGCGCTGA CTCAAACTCA CCCCAAGCTC CGTGGCAGCA TCGCAATCTC ATCGCAGGCT
GGCACAGGCT TGGATTATTT AGGTACAATG GTAGCCGAAC AGTTGCTTGG TGGTTTGCCG
CTCAGTGATG CCCGCTTAGT CACCAATCCA CGCCACCGCG AGGCTTTGCG CCGTGCCAAT
GCCGCCTTAG AACAAGCCAT CCAAGGTTTG CGCGAAGGCC GCCCAGTTGA TTTGATTGCG
ATCGATTTGC ATGAGGCGAT CGCTAGTTTA GGCGAAATTA CTGGCGAAAC TGTCGAACAT
GATTTATTGA ATATGATCTT TAGTCGCTTT TGTATTGGCA AATAA
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| Protein sequence | MLYADTIAAL ATPPGVGGVG IIRVSGPQSL AIAQALIKPR RKGVWRSYQM RYGHVLDEHG
QIVDEVLAVF FKGPRSFTGE DILEIHCHGG PLPLRRTLTL ALAHGARLAN PGEFSLRAFA
NGRIDLVQAE ATLDVIEAQT NLGLSLALDQ LGGGLSRDLR TLREQLMYPL AYVTALTDFP
EDDVPSEELQ QPLQQAQSLL SQLLAGADQG VVVREGARAA LVGRPNAGKS SLMNALLRTE
RAIVTAIPGT TRDTLEETAN LGGIPVVLID TAGITETDDV VERIGVERSR AALSKADLVL
LLIDGSQPLS PEDLAIAQLT HERPTIVIAT KADLGQHADL TALTQTHPKL RGSIAISSQA
GTGLDYLGTM VAEQLLGGLP LSDARLVTNP RHREALRRAN AALEQAIQGL REGRPVDLIA
IDLHEAIASL GEITGETVEH DLLNMIFSRF CIGK
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