Gene Haur_3433 details

Gene Information

• Locus tag: Haur_3433
• ID: 5735294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 4322957
• End bp: 4323514
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641280580
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_001546197
• Protein GI: 159899950
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02948] RNA polymerase sigma-W factor

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACAGAGA TCAATAGTGA AGAATTGACG CTGGTGCGGG CGACAATTCG TGGCGACCAA 
ATTGCATTTC AACGGATTGT CGAGCTGTAT CAAGGGCCAA TTTTCAACTT GGCCTACCGG 
ATGTTGCACG ATGGCCACGA GGCCGAAGAT GCCGCTCAAG AAATTTTCAT CCGGGCCTAT 
ACCAAGCTTG AAACGTTCGA TCAAAGCCGC AAGTTTTCTA CATGGCTCTT TTCAGTCGCA 
TCGAATTACT GCATTGACCG CTTACGCCGA CGGCGACCGA TAGTGCCACT TGATGATTTG 
GCATTTGCCC TACCAAGTAC CGATGATGGT CCTGAACGTT CAGCATTGCG TAGTGAGTTG 
CGCGATGCCG TCCAACGTGC CTTAGCTACT TTGCCCGATC ACTATCGGCT GGTAGCAGTG 
CTGCGCTACT GGAATGATCT CTCCTATCAG GAGATCGAAA ATATTACGGG GCTATCAGAA 
AGTGCGGTTA AAACTCGGCT GCATCGTGCT CGCAACATGG TGGCTGCCGC GTTGGATAAA 
CAAGGAGCAG AGCTATGA 

 

Protein sequence

MTEINSEELT LVRATIRGDQ IAFQRIVELY QGPIFNLAYR MLHDGHEAED AAQEIFIRAY 
TKLETFDQSR KFSTWLFSVA SNYCIDRLRR RRPIVPLDDL AFALPSTDDG PERSALRSEL 
RDAVQRALAT LPDHYRLVAV LRYWNDLSYQ EIENITGLSE SAVKTRLHRA RNMVAAALDK 
QGAEL