| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3418 |
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| Symbol | |
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| ID | 5735279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4305180 |
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| End bp | 4308101 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280565 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001546182 |
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| Protein GI | 159899935 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT ATCCGACCTA TGTTGAACGC CCACGTTTAC TCACTTTGAC CCAACATGCG
CCACGGGTAG TTTTAATCAT TGGGTTGCCA AGCAGCGGCA AATCCACAGT GTTAGAGGCA
CTCAAGCATT CCATCAACGC CCCGTCTGCC TTGATTCGGC TTGAAGAGTC AGCGCATGAT
CCCCTAGCGC TGCTTCAGGC TATTTGCCAA CAACTTGGCT TACCTAGCGA TCATGCACAT
GAGCAGCTTT TAAGGTTACG CCAACCAAGC TGGATTTTGA TCGACGATTT GGATCGGATC
TTGGATGCGT GGGGGACGTT CTTGCCTGAG CATGCTTGGC TGAGCGAATT ATTGAAAAAC
CCAGCCCTGC ATATTGCTGC TACTTCGTTA CATCTGCCCA ATTTGCCCAT GATTCAACAA
TCGATTATTC GTCGGCAATT GCGCATAGTG GGTATGCAGG AACTGGCCTT CACCAGCGCA
GAATTAATCG AGCTGGCGCA ACAACGGCAA CTCCACCTAA CCCACGCTCA AGCTGAGCAA
TTAATCGCCT TGACCGATGG TTGGGTTGCT CCTTGTATTT TTGCGCTCAA TCGTTCTGGT
GTGCTCAATC AATCGGCGGT AGAGTGGGTG ATGCAAGATG TGATGGCGAG TTTGCCAGCG
CCGTTGCATC AGATGCTTGA AGCTTGGCTT TGGCTTGCCC CCGATTCGAC CGAATTGCTC
CAAGCGTTAC TGCCACACTA TGATCTGCAT CGTCTGATGA TGAGTTGGGA ATATGCGGGG
TTGTTGGCGC AGTCGAGTCT TCAGTTGCAG CGTTTGCCCG AGGTCGGTCT GCGCCAGCGT
TCTGATCCAC AGGCCAGCTA TCTGAGCCCA TGGTTTGAGC AGGCTGGCGA TTGGTATCTG
GCGCAACAAC AATTATTGCC ATTTGTACAA AAAATGCAGC GCTTGCAACG TTGGGATGTG
ATTAACCATA GCCTAACGCG CAATTTGGCA TTGATTGATC GTCAGCAGTT TTTTGCTGAG
ATTGTCAATG CCTTGAATGC GGTTCCAGTT CAGCAGCTTA GCTCAAAAGT AGGTTGGTTG
TTGGTGCGCA GCTACCATCT TGGGTTACGG AATGGTGAGA AAGCCTTGCT TTTGGTTAAT
CAGCTGCTAG GCATTCATCA GCAGCCCGAT GATCAGCGCA TGTTGCGCTT GCTCAAGGCC
GATATGTTGC GAGCACAGGG CGCAATTGTC GAGGCTGATG GTTTAATTCA GCCCTATCTG
GATGACCCTG ATTTATCGCC AGCCGATCAG GCGCGGGTGC TCCGAACGCA TGCAAGTTAT
CTTGTATCGT TGGGTCAAGA TGATAATGCG ATTACCCATT TTGAGCGGGC ATATGGCTAT
ATTCAACATT CTGGCATTAA TCGTTTGCTC GGGTTGATTC TCGGTGATTA TGCGAATGCG
GCGGCACGCG CCGGACGCTA CTCGTTGGCC GATCGACTGT TACGCCAAGC GACGTTGCTG
TGGAATGAAT TAAATTCGCC TGCGGGTTTA TCGCAGACGA TGAATCTGCG GGCGGTGGTG
GCACTGCATC GTGGCCAAAT TCGTGATGCA GCCCGCTACG CTCAAGAAGC CCTCGATAAT
GCCTTGATTT CCGATAATCG GGCTGCCAAT GGTGCCTTGA TCACGTTGGG CGATGTAGCG
TTAGCTGATC GTGATTGGAC AAGTGCGATT GCGCGTTATC GTTCGGCGCG TGAGCAATTA
CGCAATAGTA ATATGGTCGA TTATCATATT TTGACCTATG CCTTGGCCTT GGAATCGCAA
GCTACGCGCC ATAGTTCGAT CGAGCAGTTG CAACGCTTAT TGATTGAGAT CGATACTACG
ACGGCCCAAA ATCCGCTTGA TCAGGCTTGG TTGGCAGTAG CTCGTAGTGC TGCTAACTTG
ACATTGAAGC TTGATGGCAC GATTCCGTTA TTGCAGCGAG CGTTGGCTGG GCTTGATAGC
GAAGGTGCGT TGGCCAAAGG TTTATTGTAT CTCTTGCTCA GCGAAGCTTT TTGGCAGCGT
GATCAATTTG GTGAGGCTCG CCAAGCGTGG GAAGCCCTTG ATAAGTTGAT TATTGATGGG
CGCAGTGGCT TGCCCGTGCT ATTGTCGGCG CTGACCGTGC ATCTCCCTGA ATTGGTTCAT
GAGGCCTATA CCCAATGGAA TTCACCATTT GCGGCACGGG TGCTGCACCA TAGTTTGCCA
ATGCCGCAAG CACCAAAATT GATTATTCGC TTAATGGGGC AGGTGCGTGT CGAGATGCAC
GGCAAGCCTG TCAAAATTCC TAAACAAGGT ATTTTATTAA TTGCCCTGTT GCTTATGAAC
CCTAGCGGGA TGACTGCTGA TGAATTACGG GCAAAAATTT GGGGATTTGA TAGTAGCAAT
GATGGCTGGC GTAAAATGTT GCAACGTACT CGCAAAGAAT TGCCCGATTG CGTTATTTCT
GATGGTTCGA TTTATCGTTT GTGTTTCCCA TTGTCTGAGA TCGACGCTGA TATTTTGGTG
ATCAATCAGA CTCCATTACA AGGCTCTGAT GCGACGCTTG ATCGTCTGCA AATAGCCGCC
GATTATGCAA GCCAAGTGTT TTTATCGGGC CATGAGGCTC CTTGGATTGA ATGGGAACGT
AAGCAGTTAT CCAAACGTGG AGCCGAAATT TGGATTTCAA TCGGCATTCA ATGCTATGAT
GCCCTGCGCT TTGATCAGGC TCAAAAGGCC TTTGCTCAAG CATTGAGACT AGATATTTCG
AATGGGCGTG CGGTTTCGCA GGCAATGAAC TTGGAGATTA ACCAAGGTCG TCGGCTTGAG
GCCTTGGCAA TCTATGACCG TTACCGTGAG GCCTTGTTTG AAGAATATGG GCTAGACCCT
TCGGCAGAGC TGCAAGCTTT GCAAAAACGT GCTTTGGATT AA
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| Protein sequence | MSFYPTYVER PRLLTLTQHA PRVVLIIGLP SSGKSTVLEA LKHSINAPSA LIRLEESAHD
PLALLQAICQ QLGLPSDHAH EQLLRLRQPS WILIDDLDRI LDAWGTFLPE HAWLSELLKN
PALHIAATSL HLPNLPMIQQ SIIRRQLRIV GMQELAFTSA ELIELAQQRQ LHLTHAQAEQ
LIALTDGWVA PCIFALNRSG VLNQSAVEWV MQDVMASLPA PLHQMLEAWL WLAPDSTELL
QALLPHYDLH RLMMSWEYAG LLAQSSLQLQ RLPEVGLRQR SDPQASYLSP WFEQAGDWYL
AQQQLLPFVQ KMQRLQRWDV INHSLTRNLA LIDRQQFFAE IVNALNAVPV QQLSSKVGWL
LVRSYHLGLR NGEKALLLVN QLLGIHQQPD DQRMLRLLKA DMLRAQGAIV EADGLIQPYL
DDPDLSPADQ ARVLRTHASY LVSLGQDDNA ITHFERAYGY IQHSGINRLL GLILGDYANA
AARAGRYSLA DRLLRQATLL WNELNSPAGL SQTMNLRAVV ALHRGQIRDA ARYAQEALDN
ALISDNRAAN GALITLGDVA LADRDWTSAI ARYRSAREQL RNSNMVDYHI LTYALALESQ
ATRHSSIEQL QRLLIEIDTT TAQNPLDQAW LAVARSAANL TLKLDGTIPL LQRALAGLDS
EGALAKGLLY LLLSEAFWQR DQFGEARQAW EALDKLIIDG RSGLPVLLSA LTVHLPELVH
EAYTQWNSPF AARVLHHSLP MPQAPKLIIR LMGQVRVEMH GKPVKIPKQG ILLIALLLMN
PSGMTADELR AKIWGFDSSN DGWRKMLQRT RKELPDCVIS DGSIYRLCFP LSEIDADILV
INQTPLQGSD ATLDRLQIAA DYASQVFLSG HEAPWIEWER KQLSKRGAEI WISIGIQCYD
ALRFDQAQKA FAQALRLDIS NGRAVSQAMN LEINQGRRLE ALAIYDRYRE ALFEEYGLDP
SAELQALQKR ALD
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