Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3404 |
Symbol | |
ID | 5735265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4286733 |
End bp | 4287818 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280551 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001546168 |
Protein GI | 159899921 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TACTGGCATG GTTAGCTCAG GTTGATCATC CGCTTGAGGA TGTGCGGCGA CGTGGCCAAA TTATCATCAG CGTGATGTGT GCGCTCCTCG TTATTGTTGT GATTGCCATT CCTTCCCTGC TCTTTAATCC GAAACCATTG ACCTCGGCTG TGGCTTTGGG CTTAGGCTTG GTTTTGGCGG TGGTGGTGAT TCCGTTGGCG CGGCGTGGCA AAGTAACGTT TGCTGGCTGG ATTGTGGTGA TTACCACCTC CGTGATCGTC TCGATTCCGA TGATGTTGCG CGGCGAAACC AGCTATACCC TAGCCTATTT ACTGGTTCCA GTCTTGATTG CTGGGGTCGT GCTGCGCCCA TGGCAAATTT TAATGGTCTT GGTTGGGGCA TGGGTGATTA TTGGCACATT GGCGTTTGTC TATCCCACAA CCGATCAGGT TGCAACAACT GGTGGGGTGG TTACCCATGC GATCTTGATT ACCATGATTG GTTCGATTAT TAGTTTTGTG AATAGCCGAA TTACGGTTGG GGCTTTTCAT GCGGTTTCCG AAGGCCAGCG CACGATCGAG CAAAATGCCA AACAATTAGT CGAATTAAAC TCCTCGTTGG AAGCCCAAGT CCATGAGCGG ACTGCCGACC TTGAAAACGC TCTCATGAAA TTGCAAGATC GGGCTAGCAC CCAAGAACGC TTGCTTGATG AGATTGAACA GCAGCGTGAA GTGATTCGCG AGATGAGCGT GCCAGTTTTG CCAGTGGCGG CCAAAGTATT GGTGATGCCA TTGATTGGAG CGCTCGACAG TGAACGCCTG ACCCGCCTGC AAGAGAATGC CTTACAAGCG GTGCAGCGTC AGTCGATCAA ACATTTGGTG CTGGATATTA CCGGAGTTGT GGTGGTTGAT AGCCAAGTTG CCCAAGGCTT TATTAGCGTG GTGCGCTCAG TACGCTTGCT TGGCGCTGAA ACCATGTTGG TCGGGATTCG ACCTGAAGTT GCCCAAGCCA TGGTTTCGTT AGGGCTTGAA TTGGATTCAA TTAGTACCTC GGCGACCTTG CAAGAAGGCT TGCAACGCAT CCCCAACTAT AATTAA
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Protein sequence | MKALLAWLAQ VDHPLEDVRR RGQIIISVMC ALLVIVVIAI PSLLFNPKPL TSAVALGLGL VLAVVVIPLA RRGKVTFAGW IVVITTSVIV SIPMMLRGET SYTLAYLLVP VLIAGVVLRP WQILMVLVGA WVIIGTLAFV YPTTDQVATT GGVVTHAILI TMIGSIISFV NSRITVGAFH AVSEGQRTIE QNAKQLVELN SSLEAQVHER TADLENALMK LQDRASTQER LLDEIEQQRE VIREMSVPVL PVAAKVLVMP LIGALDSERL TRLQENALQA VQRQSIKHLV LDITGVVVVD SQVAQGFISV VRSVRLLGAE TMLVGIRPEV AQAMVSLGLE LDSISTSATL QEGLQRIPNY N
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