| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3394 |
|---|
| Symbol | |
|---|
| ID | 5735255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4276816 |
|---|
| End bp | 4277271 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641280541 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001546158 |
|---|
| Protein GI | 159899911 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00102224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAGTA CCACCCTCAA AGTGGGCGAT CAAGCCCCCG ATTGGACGTT AACTGGAACT
GAAGGCGATG TACACTTGGC CAGCTTCCAG GGCCAAAAAA ACGTTGTGCT GTTGTTTTAT
CCATTAGATT TCAGCCCTGT TTGTTCGCTG CAATTGCCCA GCTATCAAGC TCGCAAGCCT
GAGTTTGATC AACGCGATAC CGAGATTTTT GGCATTAGCA CCGATAGCAA GTGGTCGCAT
AAAGCCTTTT CCGAGCAACT TGGGCTGGAA TATCAGTTGC TGAGCGATTA TCAGCGCCAT
GTTTCCGAGG CCTATGGCGT GTTGCGACCT GAAGGTTTTA CCAATCGAGC GGTCTTTGTC
ATTGATAAAG CTGGCATCAT TCGCCATGTT TCGGTGACTA ACCCCGGCCA ACAACCCGAC
CAAAATGAGG TCATTCGGGT TTTAGAAACG TTGTAA
|
|---|
| Protein sequence | MDSTTLKVGD QAPDWTLTGT EGDVHLASFQ GQKNVVLLFY PLDFSPVCSL QLPSYQARKP
EFDQRDTEIF GISTDSKWSH KAFSEQLGLE YQLLSDYQRH VSEAYGVLRP EGFTNRAVFV
IDKAGIIRHV SVTNPGQQPD QNEVIRVLET L
|
|---|
| |