| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3377 |
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| Symbol | rho |
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| ID | 5735238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4256731 |
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| End bp | 4257981 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280524 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001546141 |
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| Protein GI | 159899894 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000542218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCAACC TTGCTGATTT AGAAAACAAA ACGTTGAGCG ACCTCCAAGA AATGGCTCGG
GAACTCGATA TCTCTGGCTA TAGTCGCCTC AAGAAACAAG ACCTCATTTA CAAATTAATT
CAGGCTCAAA CTGAACAAGC AGGCAATATT TTCAATACGG GGATTCTCGA TATCGTTTCT
GACGGTTTCG GGTTTCTGCG CAGCGACCGT ATGTTGCCTG GCCCCGATGA TGTGTATGTC
TCGCAAACTC AAATTCGCCG CTTTGGCCTC CGTACTGGCG ACCGCATCTC CGGCCAGATT
CGTCCTCCCA AAGAAAGTGA ACGCTATTAT AGTTTGCTGC GGGTTGAATT AGTGAATGGT
ATGGACCCTG AGCAAGCTCG TAAGCGCCCC CATTTTGAAA AATTGACCCC GATTTTTCCC
AATGAACGCT TTATTTTGGA GACTGAGCCG CAAATTCTTT CAACTCGTTT GGTTGATTTG
ATTGCGCCAA TCGGTCGCGG TCAGCGTGGG CTGCTGGTTT CGCCCCCCAA AGCTGGTAAA
ACGATGCTGA TGAAGGCGAT TGCTAATGGC ATCACCACCA ATTATCAAGA TGCCCATTTG
ATGGTCTTGT TGATTGGCGA GCGTCCCGAA GAAGTCACCG ATATGCGCCG CTCAGTCCGC
GGTGAGGTGA TTGCTTCGAC CTTCGATGAG CCAGTTGAAG ATCATACCAA AGTTTCTGAA
ATGACCCTCG AACGAGCTAA GCGCTTGGTC GAAGGCGGCC AAGATGTGGT GATCTTGATG
GACTCTATCA CCCGTTTGGC ACGGGCTTAC AACTTGGATA TGCCACCATC AGGCCGAACC
TTGACTGGTG GGATCGACCC AGTGGCCTTG TACCCTCCAA AACGCTTCTT TGGTGCTGCC
CGTAACATCG AAGGCGGCGG CTCGTTGACA ATCATTGCTA CCTGTTTGGT CGATACTGGT
AGCCGTATGG ACGACGTGAT TTACGAAGAA TTCAAGGGTA CTGGCAACAT GGAATTGCAC
TTGGATCGGC GCTTGGCTGA ACGCCGCACC TATCCGGCAG TCGATATTGC CCGCTCTTCA
ACCCGTCGCG ATGAGTTGTT GCTCTTGCCT GAGCAATTGC GCCAAGTTTG GACGTTGCGC
CGTATGGTCA GTATGTTGGG CGAAAACGAA GGCACTGAAT TGGTGCTGAC GCGCATGTCC
AAAACCCGTA CCAACGACGA GTTCTTGCTC ACTCTCAACA AGAGCCTCTA G
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| Protein sequence | MVNLADLENK TLSDLQEMAR ELDISGYSRL KKQDLIYKLI QAQTEQAGNI FNTGILDIVS
DGFGFLRSDR MLPGPDDVYV SQTQIRRFGL RTGDRISGQI RPPKESERYY SLLRVELVNG
MDPEQARKRP HFEKLTPIFP NERFILETEP QILSTRLVDL IAPIGRGQRG LLVSPPKAGK
TMLMKAIANG ITTNYQDAHL MVLLIGERPE EVTDMRRSVR GEVIASTFDE PVEDHTKVSE
MTLERAKRLV EGGQDVVILM DSITRLARAY NLDMPPSGRT LTGGIDPVAL YPPKRFFGAA
RNIEGGGSLT IIATCLVDTG SRMDDVIYEE FKGTGNMELH LDRRLAERRT YPAVDIARSS
TRRDELLLLP EQLRQVWTLR RMVSMLGENE GTELVLTRMS KTRTNDEFLL TLNKSL
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