Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3320 |
Symbol | |
ID | 5735190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4184330 |
End bp | 4186093 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641280467 |
Product | DNA repair protein RecN |
Protein accession | YP_001546084 |
Protein GI | 159899837 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTAG AATTATTTAT TGCCGATTTC GCAATTATTG ACCAAGTACG CCTGCACTTT ACCCCTGCCT TTAATGTGCT GACGGGTGAA ACCGGAGCCG GTAAGTCAAT TATGATTGAT GCACTCGGCA TGTTACGGGG CGAGCGGAGC GATCCCAGCT TTGTGCGAGC GGGAAGCAAT CAAGCCCGGG TTGAAGGTAT CTTCACCTTG GCTGATCGCC CTGATATTCT GCCTATTTTA GCCGAATATG GCCTTGATGG TGCTGATGAT GATCAGATTA TTCTGACCCG TGAAATTCAT GGAGCCAGCG GGCGTAGCGT TGCTCGAATT AATGGCCGCG CCGTGAGTAG TGCTGTGCTC CGTGATATTG GCGGGCGCTT GGTCGATATC CACGGCCAAA ACGATAGCCA AACCTTGTTC AATGTACGCA CCCACGCCGA AATGCTCGAT CGCTATGCTG GAGTTGTCGC TGATCGCGAA CAACTGAGTC AGCAGGTGAT CGCGATTGAA GCCGTGCGCA GCCAAATTAG CACCTTGCGC AATGCCGAAG CGCGTCGCCT CGAACGGATC GAAGAATTGA CCTTTTTGGT TGAGGAATTG ACCAACGCCA AGTTGATCGC TGGCGAAGAG GCTACGTTAA CCAACGAACG CGGTTTATTA CAAAATAGTG CTAAAATCAC GGGCACGGTT GATACGATCT ATCGTTTGTT GCGCACTGGC ACGCCAGCCA GCGAACGGCG TTCAGCCACC CGTTCAATTG TCGATAGCCT TGATGATGTG GCTAATTTGT TGAGCGAATT GTTGCGGCTA GACCCAAGTT TGGCTGGATT GAACGAGCAA ACCCTTGAAG TGCGCTATCG ACTTGACGAT GTGATCGAAG GCGTGCGGGT CTATCGCGAT CGGCTGGAGT TTGAGCCAGG CCGTCTCGAA GTGATCGAAG ATCGTTTAGC TGAGTTGCGC GATTTAGCCA AAAAATACCG TGCTGCCGAT GCTGCCGAAT TGCTCGAACG CTTGACCAGT GCCAGCGATG AACTGGAAAC CTTGCACTAC AGCGCTGAAC ATATTGCCGA ATTGGTGCAA CAAGAACAGC AATTGTTGGC AAGCATTGGG CTAGCTGCCG CTGAACTGAG CCGCCGTCGT CGCCAAGCAG GCGATGAATT GGCTGGGCGG ATTGCCGCTG CCATGAGCGA TTTAGCCATG CCGCATGTTA AATTTCATGT GCAAGTATCG CAGCGCAGCG ACCCACAAGG CGTATTGATC GATGATCACT ATCTCGCCTT TGATCGCACG GGAGTTGATC AGATTGAGTT TTTACTCAGC CCCAACCCTG GCGAGCCACT CAAACCGCTG GCCAAAATTG CCTCTGGTGG TGAATCGGCA CGCTTGCTCT TGGCGATGAA ATCAATTCTT TCAGCAGTTG ATAGTGTGCC AACCTTGGTT TTTGATGAAG TTGATGTGGG AGTTGGGGGA CGGGCTGGCC ATGTGGTCGG CGAAAAATTA TGGGGCATTA GCGATGCCCA TCAAGTGTTG TGTATTACCC ACTTGCCTCA AGTTGCCGCT TTTGGTGATT GCCATTTTGC GATTGCCAAG CAAGTTATTA ACCAACGCAC CCAAACCTTT GTGCAACCAC TCAGCGAACA AGAACGCATC GAAGAACTAG CGGCGATGCT TGATGGAACA CCAGTGAGCG AAGCGAGCCG TCGCTCGGCC AGCGCCATGC TCGAACGGGC TGCCAACTAC AAACTGGCAA CCAGCAACCC ATAA
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Protein sequence | MLLELFIADF AIIDQVRLHF TPAFNVLTGE TGAGKSIMID ALGMLRGERS DPSFVRAGSN QARVEGIFTL ADRPDILPIL AEYGLDGADD DQIILTREIH GASGRSVARI NGRAVSSAVL RDIGGRLVDI HGQNDSQTLF NVRTHAEMLD RYAGVVADRE QLSQQVIAIE AVRSQISTLR NAEARRLERI EELTFLVEEL TNAKLIAGEE ATLTNERGLL QNSAKITGTV DTIYRLLRTG TPASERRSAT RSIVDSLDDV ANLLSELLRL DPSLAGLNEQ TLEVRYRLDD VIEGVRVYRD RLEFEPGRLE VIEDRLAELR DLAKKYRAAD AAELLERLTS ASDELETLHY SAEHIAELVQ QEQQLLASIG LAAAELSRRR RQAGDELAGR IAAAMSDLAM PHVKFHVQVS QRSDPQGVLI DDHYLAFDRT GVDQIEFLLS PNPGEPLKPL AKIASGGESA RLLLAMKSIL SAVDSVPTLV FDEVDVGVGG RAGHVVGEKL WGISDAHQVL CITHLPQVAA FGDCHFAIAK QVINQRTQTF VQPLSEQERI EELAAMLDGT PVSEASRRSA SAMLERAANY KLATSNP
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