Gene Haur_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3301 
Symbol 
ID5735171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4166904 
End bp4168037 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID641280448 
Productpyruvate carboxyltransferase 
Protein accessionYP_001546065 
Protein GI159899818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR02146] homocitrate synthase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0533542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGC ATTTTGCAAT TGTTGATACG ACATTACGCG AAGGCGAACA ATGGGCCAAT 
GCTCATTTCA GCAGTGAAGA TCGCCTCGCC ATCGCCAATT TGCTGGTTCA GTTTGGCGTT 
GAATACATCG AAATGACCTC TCCCTGCGCC TCGCCGCAAA GTACGGCAGA TTTGCGCAGC 
ATCGCAGCCT TGCCGCTCGG CAACACCAAG CTGCTGACCC ACACCCGTTG TAACCTTGAT 
GACGTGCGGC TCGCTGCTGA ATGTGGCGTG GCTGGCGTAA ATATCCTCTT TGGCACATCA 
CCCTATCTGC GCCAATGGAG CCATGGTCGC TCAATTGAAG CGATTTTGGA AGAAGTTGGC 
CCAGTTGTGC GTTTCCTCCA AGAACGAAAT ATCGAAGTTC GGTTCTCCTG CGAAGATTCA 
TTCCGCACCC CACTGCCCGA TTTATTGCGC GTCTACCAAG CTGTCGATTT GCTTGGCGTG 
CAGCGGGTTG GCATCGCCGA TACGGTGGGC ATTGCCACGC CACGCGATGT TGAACGTGTG 
GTTGGTGCAG TCCGCAATGC AGTTCGCTGC GACATTGAAT TTCATGGCCA CAACGATGGC 
GGCTGTGCAA TTGCCAATGC CTATGCAGCG CTCGAAGCAG GCGCAACCCA CATCGATACG 
ACCATTCTTG GCATTGGCGA ACGCAACGGC ATCGCCGCGC TCAGCGGCTT AATTGCCCGC 
CTCTACCTCT CCGAACCTGA AAGTGTTGCA GGCTATGCCT TGCCAATGTT GGCCCAACTT 
GATCACACAG TTGCGGCAAT CTTGGGCATT CAAGTGCCAT TCAATGCCTG TATCACCAGC 
GAAACCGCCT TTGCTCACAA GGCTGGCCTG CATACCAAGG CTGTTTTGGC CAATCCCAGC 
ACCTATGAAG CGATCGATCC CAAGGCTTTT GGGCGCGAAC GCAATGTGCT GATTGGTCAT 
CGCCTGACTG GTCGCCATGC CTTGCAAAGC CGCGCCAACA CCCTAGGTTT GGATCTGAGC 
GACACCACGA TTATCGCGAT TGCAGCCCAA CTCAAAGCTG CTGCCGATGA TCAGCCGTTG 
ACGCTCGATG AGGTGGATGC GCTGCTGCGC TCAAGCACCC TCCAAGCAGC CTAA
 
Protein sequence
MTRHFAIVDT TLREGEQWAN AHFSSEDRLA IANLLVQFGV EYIEMTSPCA SPQSTADLRS 
IAALPLGNTK LLTHTRCNLD DVRLAAECGV AGVNILFGTS PYLRQWSHGR SIEAILEEVG 
PVVRFLQERN IEVRFSCEDS FRTPLPDLLR VYQAVDLLGV QRVGIADTVG IATPRDVERV 
VGAVRNAVRC DIEFHGHNDG GCAIANAYAA LEAGATHIDT TILGIGERNG IAALSGLIAR 
LYLSEPESVA GYALPMLAQL DHTVAAILGI QVPFNACITS ETAFAHKAGL HTKAVLANPS 
TYEAIDPKAF GRERNVLIGH RLTGRHALQS RANTLGLDLS DTTIIAIAAQ LKAAADDQPL 
TLDEVDALLR SSTLQAA