Gene Haur_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3299 
Symbol 
ID5735169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4163946 
End bp4164974 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content51% 
IMG OID641280446 
ProductSCP-like extracellular 
Protein accessionYP_001546063 
Protein GI159899816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000136792 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTGG CATCTACTTG GCGGCGCAGC CGCTGGATCA GTTTGGTTGT AACAAGTTTG 
TTGGTATTTG GCTTGGTGGC CCCACTTGCA GCCCAAGAAC CCCAAGCTAT CGCTGGCGGC
AGCATGAATT ATCTGCCTGC TGTGATGTCA AACCCTGAAC TTGATATCAA TAACCGCCAA
TCGGTGGTCA ATTTCTATAC CAATTTCTAC TTGCCAAGCG AAGGCGTAGC CGATGGCTGG
ACTGGCAGCC AAGCCAGTTG TAACGCTGGC ACAACTAGCC AAGCCTATCG CGATGCAATT
CTGTTGCGAG TTAATTATTT TCGTAAAATG GCGGGCATGG CCGCAGTCAC CCTCAACGAG
AGCTACAATA GCCAAGCCCA ACAAGCGGCC TTGATGATGA GCCGCAACAA TAGCCTCAGC
CATAGCCCAC CAACGTCATG GGCTTGCTAC ACCGCCGCAG GTAAAACTGC CGCAGGTAAA
TCGAATCTCT ATTTGGGTCA AATTGGGCCA GGTGCAATTA CGGGCTATAT GCTTGATCCT
GGGGCTGGCA ATAGTGCCGC TGGTCACCGC CGCTGGATTC TATACCCGCA AAATAAATCT
ATTGGGACTG GCGATGTGCC CAGCCGTAGC GGTTATGCTG GCTCAAATGC ACTCTACGTG
ATCACCAGTG ATTTTGGCAC GGCCAGACCT GCCACCCGCA CCGAATATGT GCCATGGCCG
CCAGCAGGTT TCGTGCCCTA TCAAGTGGTG TTTGGGCGTT GGTCGTTTGC CTTGCATAAC
GGCAATTTTA GCAATGCAAC CATCACAATG AGCCAAAATG GCACGAATAT TCCCGTCACC
AAAGAAACGG TTGCCACAGG CTTTGGCGAA AATACGATCG TTTGGATTCC CCAAGGCTAC
AACCATAGCT CAAGTTGGGC GCAGCCAAGC GCCGATACCA CCTACACAGT CACGATCAGC
AATGTTGTGG TTAATTCGCA AAATCGCTCC TTCACCTATA ATGTAACCGT GATTAATCCA
AATCAATAG
 
Protein sequence
MQVASTWRRS RWISLVVTSL LVFGLVAPLA AQEPQAIAGG SMNYLPAVMS NPELDINNRQ 
SVVNFYTNFY LPSEGVADGW TGSQASCNAG TTSQAYRDAI LLRVNYFRKM AGMAAVTLNE
SYNSQAQQAA LMMSRNNSLS HSPPTSWACY TAAGKTAAGK SNLYLGQIGP GAITGYMLDP
GAGNSAAGHR RWILYPQNKS IGTGDVPSRS GYAGSNALYV ITSDFGTARP ATRTEYVPWP
PAGFVPYQVV FGRWSFALHN GNFSNATITM SQNGTNIPVT KETVATGFGE NTIVWIPQGY
NHSSSWAQPS ADTTYTVTIS NVVVNSQNRS FTYNVTVINP NQ