| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3255 |
|---|
| Symbol | |
|---|
| ID | 5735123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4117233 |
|---|
| End bp | 4118333 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641280401 |
|---|
| Product | WD-40 repeat-containing protein |
|---|
| Protein accession | YP_001546020 |
|---|
| Protein GI | 159899773 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0515461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG TTAACCCCTC GCCAACGATT TCAAACGTTG TCTGCAATCA ATTATCAATT
GTGCTCTTGG TGGGCGTAAT GTTGGGAACA TTAACTGCCT GTAGCACTTC AAGTTCTAAT
CCGTTGCCTA CAATTGGCAT TGATGTCGGG CCAGGGGTTA ACTTTCGCGG CGATATTGTG
GCGCTCCAGT TTCTGCCCAA CCAACAGCTT TTGGTGGGGG TTGGCTACGA TGGGGTTTAT
CGTTGGAAGC TTGCTACGAG CACAATTGAA CAAACCCTTG CCGCCAAACA AATTTACTTG
GCCTTTACAG CTTCAGGGCC ATTGGTTGTA AGCACTGATC GTAAAACGCT GACGACTTGG
AATAGCACTG ATGGCCAAAA AATTCTGGCG TGGAATGCCA AACCATTGCA ACTGCCTAGC
CAAACCACTG CCTTTGAAGT CAGTGCCCTC GCAATCACAC CTGATCAGCA GCAAATTATT
GCAGCCTACA ACAAAGGTAG CATGCTCCAA GCTTGGAACG TGGCGACTGG TGCGGCAACA
ACGACCTTTG GTGCTCCGGC CAAAACTGGC TCAATTGTTG AAATTGCGCT CAGCCCTGAT
GGTCAATTAC TGGCCAGCAA CGATTTTAGT GGCGTAGTGC AGATTTGGGA TGTAGTGAGT
GGTCAGCAAT TACATTCATT CAAAGAAGCC AGCCTCAACT ATCAACCAGG CAAATTGGCT
TGGAGCCACG ATGGCAAATG GCTGGCAGCC AGTAGCGGCG ATAAAAACGG CGGCGGAGTC
GCGATTTGGG ATACCAGTTC ATGGTCAATC TATGCCACGC ATCGCAGCAG TGAGCACCAA
TTTGCTGGTT TGGCCTTTCA TCCAACCGCT CCAACGTTGG CGATTGGCAA TAGTAGTGGC
TTGATCGAGT TGTACGATCT GACCAGCAAA CAAGTCAGCA ACAGCCTCAA AGGCCATGCC
GAGCGGGTTA CAACCTTGGC ATGGAATGCT GATGGCAGCC AATTGGCCTC AGGCGGCAAA
GAACCATTTG TCCTGATTTG GGATAGTACA AGCCTGACCG AGCAGCAACG TTTGGTTTTG
CCAGCTACAC CATTACAGTA A
|
|---|
| Protein sequence | MRYVNPSPTI SNVVCNQLSI VLLVGVMLGT LTACSTSSSN PLPTIGIDVG PGVNFRGDIV
ALQFLPNQQL LVGVGYDGVY RWKLATSTIE QTLAAKQIYL AFTASGPLVV STDRKTLTTW
NSTDGQKILA WNAKPLQLPS QTTAFEVSAL AITPDQQQII AAYNKGSMLQ AWNVATGAAT
TTFGAPAKTG SIVEIALSPD GQLLASNDFS GVVQIWDVVS GQQLHSFKEA SLNYQPGKLA
WSHDGKWLAA SSGDKNGGGV AIWDTSSWSI YATHRSSEHQ FAGLAFHPTA PTLAIGNSSG
LIELYDLTSK QVSNSLKGHA ERVTTLAWNA DGSQLASGGK EPFVLIWDST SLTEQQRLVL
PATPLQ
|
|---|
| |