| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3247 |
|---|
| Symbol | |
|---|
| ID | 5735115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4110036 |
|---|
| End bp | 4110779 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280393 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001546012 |
|---|
| Protein GI | 159899765 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.111578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTT TAGGCCTTGA TATTGGCGGC ACAGGCATCA AAGCGGCTCC GGTCGATTGT
TCAACTGGCA AATTGTTGGC CGATGTAGAG CGCCGTGATA CGCCTCAGCC TGCCACACCC
GAAGCAGTAC TTGAAGTCGC TCAAGAATTA GTCGAGCACT TTGCTTGGCA AGGGCCGATT
GGTTGTGGTT TTCCAGCGGT AGTGCAACGT GGAATTGTGC GGACGGCCTC GAATATTGAT
CAACGCTGGT TACATTGCGA TGTGGCAGCT CGTTTCAGCC AGCATTTTGA TCGTCAGGTG
ACGGTGATCA ACGATGCTGA TGCTGCTGGC TTAGCCGAAA TTACCTTTGG TGCTGGCCGT
GAAGTGATGG GCACATTGCT GATGTTGACG TTGGGCACAG GCATTGGCAC GGCGTTGTTT
CATGATCACG ATTTATTGCC CAATTTGGAG CTTGGCCAAA TTAGTGTGCG CGGCAAACCA
GGCCACGAGT GGGCCGCCGC CAGCGTGCGC GAAGAGCAAA ACCAAAGCTG GGAGCAATGG
GCGCAGGGCG TAGAGCTATT TCTGCAAACC ATCGAAGTGA TGCTCTGGCC TGATCTGATT
ATTCTGGGCG GTGGCGTGAG CAAAGATGCT GATCAATTTT TAGATCGAAT TCGGATTCGC
GCTAAACTTG TGCCTGCTCG GCTTACCAAC GATGCGGGAA TTATTGGTGC TGCTTTGTTT
GCGGCTCAAA TAAGCCCCGA ATAA
|
|---|
| Protein sequence | MQILGLDIGG TGIKAAPVDC STGKLLADVE RRDTPQPATP EAVLEVAQEL VEHFAWQGPI
GCGFPAVVQR GIVRTASNID QRWLHCDVAA RFSQHFDRQV TVINDADAAG LAEITFGAGR
EVMGTLLMLT LGTGIGTALF HDHDLLPNLE LGQISVRGKP GHEWAAASVR EEQNQSWEQW
AQGVELFLQT IEVMLWPDLI ILGGGVSKDA DQFLDRIRIR AKLVPARLTN DAGIIGAALF
AAQISPE
|
|---|
| |