| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3230 |
|---|
| Symbol | |
|---|
| ID | 5735098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4089256 |
|---|
| End bp | 4091166 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280376 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001545995 |
|---|
| Protein GI | 159899748 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00732898 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATA CAAGCGCTCC GAGCGCAGCT ATTCTCGCGA TTCTGCAGAA TGATAATGCA
GTGGCGCAGG CGCAGGAACT TCGGGCGTTT GGCGCAACCT GGCAAAGCCA AAACGCTGAT
CCGCAAATGC TGACCAAACT TGGCATCGAA GCCGCTACCC AAGCTCGGCT TGATCCCAGT
GCGGTGGTAA CCGATCTCTT GCTTGGCTAT GCCGCCGCCC GCGAGGAGCA ACGCACTCGC
CATTGGCAAA ACCACTTGAT GCGCCGCGTG CAGCAGTTGG ATGGTTTGCA TCGTATTATT
AGCGCCGCCA ACTCAACCCT CGATATTGAT GCCTCACTCC AAACCGTCGT CGATACAGTC
AGCGATGTGA TGCGGGTCGA TGTTTGCTCG ATTTATCTCT TTGATCAGCA TCGGCGCATG
TTGCGATTGG TCGCGACTCG TGGGCTGAAT CCCAAGGCAA TCGGCACGGT TGAGGTGGAA
ATCGGTGTGG GCGTGACTGG TTGGGCTGGC GAATTGGGCA AGCCGGTGGC GATTTTTGAT
GTGCGCAATG AGCCACGCTA CCAGCTTGAG CCACTGCTCG AAGAATGGCA TTTTCGCTCG
CTGTTGGCAG TACCAGTAAT TTTATTTGCC AGCGAACGCC ACCATATCGA AACCCTGCAA
GGCGTGATTA CGGTGCAAAA TCGCGATCCC CATGAATTTT CGCAAGAGCA AACCTCATAT
CTCGAAGTTG TGGCGGGGGA AATTGCGCTC TCAATCGCCA ATGCCCAAAT GTATCAACAA
ACTGATGCTC GTTTACACCA AAAAATTCGT GAATTAACCA CCTTGCAGCG CGTAACAGCG
GCGCTAGCCT CAACCTTGGA TGTTGATACG TTGCTGCATT TGATTGTGGA GCAAGCTGTC
AAGATTGCCG ATGTTGATCG GACTGATATT TTCCAAGTAC GCCCCAACAA CAAGGTGAAA
ATGTTGGCTT CATATGGGCC TGGCCGCACT TCCGGCGTAG AAGATATGAT CGTGCAGGTG
ATTCGTGAGC ATCGCGCGAT CGCGGTGCCA AATGCCTACA CCGACGAACG TTGGTCGGGC
GTGCAGGCGA TTGCCTATCG CGAGGGCTTT CATTCGTTGT TTGCGCTGCC GATGCGCACG
GGCAATCGGA TTATCGGGGC ATTATGTTTT TATAGCTATG CGCCGCGCCA TATTGAATAT
GAGCAGGTGC AATTGCTCAC CACCTTTGCC GATGAAGGTG CAATCGCGAT TGAAAATGCC
CGCTTGTACG AAGAAACCCA GCGCAATCTG ACGATCAAAT CAACCTTGCT GCAAGAAATT
CATCATCGCG TCCGCAACAA CTTACAAACG ATCTCAGCGT TGCTGCAAAT GCAGGCACGG
CGTTTGAACA CCGAAACTGA AGGTCGGCAA GCACTTGATG ATAGTGTACG CCGCATCCAT
GCCATTGCCG CAGTGCATAA TTTGCTCAGC CACGATGGCG AAGGCCAAAC CACGGTGCAA
GATATTGCCA AGCAAATTGC CGAAAATATT CAGATGAGCC TGCCAAGCGA AACGCCAGTT
GAGTTTTTGA TCACTGGCGA TTCAGTTTCG GTCAATGCGC GGGCGGCTAC TGTGCTGGCG
ATCGTGATCA ACGAATTGGT GCATAATGCG CTTGATCATG GCTTGAGTGC CGAAGGCGGC
ATTATTGGCA TCGACGGCTG GATGGAAAAC GAAGAACAGG CTTGTGTCCA AGTGCGCGAC
GATGGCCCAA TCCGACCGGA GCCAGTCAAA CGTCGTGTAA GCACTGGGCT AGGCCTTGGC
ATTATCGAAA CTCTCGTCAA CACCGATCTT GGCGGCAAAT TTGAGTTCAA ACGTGAAACT
GAATGGACAC GGGCATTAAT TACTTTTGCG CCCGATGAGT TGGATGATTA A
|
|---|
| Protein sequence | MIDTSAPSAA ILAILQNDNA VAQAQELRAF GATWQSQNAD PQMLTKLGIE AATQARLDPS
AVVTDLLLGY AAAREEQRTR HWQNHLMRRV QQLDGLHRII SAANSTLDID ASLQTVVDTV
SDVMRVDVCS IYLFDQHRRM LRLVATRGLN PKAIGTVEVE IGVGVTGWAG ELGKPVAIFD
VRNEPRYQLE PLLEEWHFRS LLAVPVILFA SERHHIETLQ GVITVQNRDP HEFSQEQTSY
LEVVAGEIAL SIANAQMYQQ TDARLHQKIR ELTTLQRVTA ALASTLDVDT LLHLIVEQAV
KIADVDRTDI FQVRPNNKVK MLASYGPGRT SGVEDMIVQV IREHRAIAVP NAYTDERWSG
VQAIAYREGF HSLFALPMRT GNRIIGALCF YSYAPRHIEY EQVQLLTTFA DEGAIAIENA
RLYEETQRNL TIKSTLLQEI HHRVRNNLQT ISALLQMQAR RLNTETEGRQ ALDDSVRRIH
AIAAVHNLLS HDGEGQTTVQ DIAKQIAENI QMSLPSETPV EFLITGDSVS VNARAATVLA
IVINELVHNA LDHGLSAEGG IIGIDGWMEN EEQACVQVRD DGPIRPEPVK RRVSTGLGLG
IIETLVNTDL GGKFEFKRET EWTRALITFA PDELDD
|
|---|
| |