Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3189 |
Symbol | |
ID | 5735064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4034303 |
End bp | 4035208 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641280335 |
Product | citrate (pro-3S)-lyase |
Protein accession | YP_001545954 |
Protein GI | 159899707 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0128752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTCAA GGATTCGCCG CAGTGAAATG ACCTGCCCCG CCCATAGCCT AGCCATGATC ACCAAAGCCG CCGCCTCTGA GGCCGACGAA GTGATTATCG ATTTAGAAGA TGCTTGCGCC GTTTCACAGA AAATTGCCGC CCGTGCCACA GTCATTCAAG CCTTGCAAAG CTTAGATTTT GGCCAGAAAA TTGTAGCAGT GCGCCCAAAT GCGGTGCAAA CTCATTATCA CTATCGCGAT GTCGTTGAAA TTGTCGAGGC GGCTGGCGCT AAAATTGATG TTTTGGTGAT TCCCAAAATT GAAAGCGCTG ACGATGTGCG CTTCGTTGAT CGGTTGCTCA GTCAAATCGA GGCCAATATT GGCTTGCAGG TTGGCACAAT TAAGCTCGAA GTATTAATTG AAGGCACTCG CGCCTTGCAA GCGGTTGAGC AGATTGCCAA CGCCTCGCCT CGTTTGGAAA GCTTAATTTT TGGTTTGGCG GATTATGCAG GCGATTTGGG AGCACGCTCG GCAGATGATC AATGGGGCAT GTTTGCTTAC CCCAAGCACA AAATGTTGGT AGCGGCCAAA GCGGCGGGCC TAGAGGCGAT CGATAATGTG ACCTTTGCCT TTCGCGATGC CGAGGCCTGC CAACGCGATG CAGAACGCGC TGCCGCGATG GGTTTCGATG GCAAATGGGC AATTCATCCG GTACAAGTGC CAATCATCAA CCAAGCCTTT TTGCCCAGCG CTGCCGAAAT TGCCGAAGCT CAACGCCTGA TCAAGGCCTA CCAAGCTGCC GATCAACAGG CAGGCTTAGG GGCAATTGCG ATTGATGATC AGATGATCGA TGCAGCAAGC TTGCGGGTTC ATGCCAAAAA ATTAGCTATG GCGCAACGGG CAGGGTTAAT CGCCATTCAG CCTTAG
|
Protein sequence | MSSRIRRSEM TCPAHSLAMI TKAAASEADE VIIDLEDACA VSQKIAARAT VIQALQSLDF GQKIVAVRPN AVQTHYHYRD VVEIVEAAGA KIDVLVIPKI ESADDVRFVD RLLSQIEANI GLQVGTIKLE VLIEGTRALQ AVEQIANASP RLESLIFGLA DYAGDLGARS ADDQWGMFAY PKHKMLVAAK AAGLEAIDNV TFAFRDAEAC QRDAERAAAM GFDGKWAIHP VQVPIINQAF LPSAAEIAEA QRLIKAYQAA DQQAGLGAIA IDDQMIDAAS LRVHAKKLAM AQRAGLIAIQ P
|
| |