| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3188 |
|---|
| Symbol | |
|---|
| ID | 5735063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4033255 |
|---|
| End bp | 4034211 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641280334 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001545953 |
|---|
| Protein GI | 159899706 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00496766 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG CAATCGGGAT TGATCTCGGG GGCACGCATT TACGTGCGGC CTTAGTTGAC
CGAGATGGTG AAATTCTTGC TCATGAACGG ATTCGCACCG AAGCGCATGA AGGTGCTGAA
GCAGTTGTTG GTCGGATTAC TCAATTAATT AACGCCATGA TCGCTGCGGC GAATGGTGCA
ACAATTGTCG GCGCTGGCAT CGCCGCACCT GGCCCACTCA ACCCCTTTAC CGGTACGGTC
ATTACCATGC CCAACTTGCC AGGTTGGGAG AACTTCCCCA TCCGCGATCG AATCGCCGCC
CAAGTTCCGT TTCCAGTCGT GCTCGGCAAT GATGCCAATT TGGCTGCTGT CGGCGAATGG
TTATTCGGCG GTGGTCGTGG CATGCAAAAT ATGATTTACG TCACGATCAG CACGGGCGTT
GGTGGTGGGG TCATTTGTGA TGGTCGGTTG TTGCTCGGTC ACAATGGCTT TGCCGCCGAA
GTTGGTCACA TGGTGCTCGA CCCGCATGGC TTTGCACCCG CCACGGCCAC CCCAGCTGGT
TCGTGGGAAG CGCTCGCATC AGGCACATTT TTGGCCTACC ACGCTGCCGA AGCGATGCGA
GCAGGCACTG CCACCGTACT TAATCAATTA ACCACTCCCG ATGCCGTCAC CACCCATCAT
TTAGATCTGG CGGCGCAACA AGGCGATGAG TTGGCAATTC GCTTAATCGA AAATGCTGGC
TTTTGGTGTG GGATTGCCTT CGTCAATTTG CTGCATATGT TCAGCCCTGA AGCGATTTTC
GTGGGCGGCG GGGTTTCCAA CTTAGGCGAT CGTTTGCTCA ACCCAGCTCG CGCCGAAATT
ACCAAACGCG CCTTGCCCGG CTATCGCAAT GTGCCAATTC ATCAAACCAA GATGGGCGAT
AATCTAGGGG TGCTTGGCGC TGCTGCCTAT GCATTTAGCT CAATCCAACA AGCCTAA
|
|---|
| Protein sequence | MAFAIGIDLG GTHLRAALVD RDGEILAHER IRTEAHEGAE AVVGRITQLI NAMIAAANGA
TIVGAGIAAP GPLNPFTGTV ITMPNLPGWE NFPIRDRIAA QVPFPVVLGN DANLAAVGEW
LFGGGRGMQN MIYVTISTGV GGGVICDGRL LLGHNGFAAE VGHMVLDPHG FAPATATPAG
SWEALASGTF LAYHAAEAMR AGTATVLNQL TTPDAVTTHH LDLAAQQGDE LAIRLIENAG
FWCGIAFVNL LHMFSPEAIF VGGGVSNLGD RLLNPARAEI TKRALPGYRN VPIHQTKMGD
NLGVLGAAAY AFSSIQQA
|
|---|
| |