Gene Haur_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3172 
Symbol 
ID5735047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4009574 
End bp4010308 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID641280318 
Productsilent information regulator protein Sir2 
Protein accessionYP_001545937 
Protein GI159899690 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGATT TGCCAGACGT TTTGTTGCAA CGCTTACGCA ATGCCCAATC AATTACAGTG 
CTGACAGGTG GGGGTTTGGC TCAAGAGTGT GGGATTCCAA GTTTTCGCGA GGCCCAGCAA
CTCGATTCAC GTTGGGCTGG CTACGAGCCG CAAGAACTGG CAACGGTTGA GGCATTTTTG
CGCAATCCAC GCTTGGTTTG GGAATGGTTT GCCTATCGGC GTGGTTTGGC CGAGGCGGCT
CAACCAAGCG CAGCCCATTA TGCCTTGGTG GATTTAGAGC AACTTATGCC AAAGTTCAAG
CTGATTACCC AAGCCACCGA TGGATTGCAT TGGCGAGCAG GCAGCCGTGA ATTGATCGAA
CTGCATGGCA ATTTAGCTCG AATGCGCTCC TATGAAGATG GCGGTATGGT CGATTCGTGG
GATGAAACCG AAATTCCGCC GCGCTGCCCG CGAACTGGCG GCTATCTGCG CCCTGATGTA
GTGTTGTATG GCGAAGGTGT GCCACGCGAA CGTTTGCGCG AAGCTGATCA AGCGACCATG
TGTGATGTTT TTCTGTGCAT TGGCACCGAT TCAGTTGTGC AGCCCGCCGC CTCGTTGCCA
TTGCATGCTA AACGTCATGG TGCAACCGTG ATTGAAATTA ACCGCCAGCC CTCGACCTTT
GGCTTTTTTA CCGATCATGC CTTCCATGGC AAATTGGCCG AACTATTACC ACAATTAGTT
GCTGCGCTTG AGTAA
 
Protein sequence
MFDLPDVLLQ RLRNAQSITV LTGGGLAQEC GIPSFREAQQ LDSRWAGYEP QELATVEAFL 
RNPRLVWEWF AYRRGLAEAA QPSAAHYALV DLEQLMPKFK LITQATDGLH WRAGSRELIE
LHGNLARMRS YEDGGMVDSW DETEIPPRCP RTGGYLRPDV VLYGEGVPRE RLREADQATM
CDVFLCIGTD SVVQPAASLP LHAKRHGATV IEINRQPSTF GFFTDHAFHG KLAELLPQLV
AALE