| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3158 |
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| Symbol | |
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| ID | 5735030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3986763 |
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| End bp | 3989207 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280301 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001545923 |
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| Protein GI | 159899676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.385095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATGC CAGCCCTAAT TGGATTGCTC GTTGATGCTG TGCTTGCTGT GTCGCCTGCC
GCTGATCGCC TGACCATTGA AGCGGCGTTT GGTGCGATGT TGGCAGGTAA ACCAACGCTA
CTTGATGATG CTCCTTTATC GCTGCTAATT GATCAATCGA GCGCTCAATC CCATGCGACA
ATCGTGTATG CAGGCCAGAC GATTGCTGTT GAGCTGGCTG AGCCGCTTGA CCCGCTGGTT
GTAGCGCTAG CGGCGGTCGC CTCGTTGCCA CTGACAACTG TGCCTGCCCC GCGTGCCGAT
CAACCAGCGG CCTCGCGACT ACCATTTGAA TCAAGTAGCA CGTTTGTTGG GCGTGAGCAA
GAATTGTTGG CGCTGGCCGC CGCGCTTAGC CATGCTCAGC CTACGATTGT GCTGCCCGCC
GTGGCAACTG GCCTTGGCGG AATTGGCAAA ACCAGCTTGG TCACTGAGTT TGCCTATCGC
TATGGCAGCT ATTTCCACGG CGGCGTATTT TGGATCAACT GCGCTGATCC TGAGCAGGTT
GAAAATCAAA TTGCTGCATG TGCCGAGGCG CTGGCGATCG ATCCAACAGG TTTGACGCTT
GATGCCCAGG TGCAACACGT TTTAGCAGCA TGGCAAGCGC CGCTGCCGCG CCTACTCATT
TTCGATAATT GTGAAGATCC AGTGATCCTT GAGCGTTGGA TGCCGACGTT GGGCGGTTGT
CGGGTGTTGG TGACCGCCCG CAATCAATTA GCAACGATGA GCGCGATTCG GCTTGGAGTT
TTGGCTCCTG CCGAAAGCCG TGCCTTACTA CAACAGCTTT GCCCACGCCT GACAACTGCT
GAAGCCGAGG CAATTGCCGC CGATCTTGGG CATTTGCCGT TGGCCTTGCA GCTTGCAGGC
AGCTACCTCA ATACTTATGA TCAACAGAGT GTTGCTCAAT ATCGCCAGGA TTTGGCGGTT
ACTCATCATT CGCTCAAAGG TGGTGCGGGA TTGCCCTCGC CAACCCGCCA TGAACAAGAT
GTTGAAGCGA CGTTTATGCT CAGTTTGCAC CAGTTTGATT CGGCTAATGC ACTGGAGATG
TTGGCCTTAG ATATGTTGGA TGGTGCGGCT TGGTGTGCGC CAGGTGTGCC AATCCCCCGT
CAGCTTGTGC TCGATTTTGT TCCCGATGAA ACGAATGCTG AAACTGCACT CGCAGCGCTG
CAATTGTTGG AGCAACGTGG ATTAATTGAT GGGAGCGAGG CGCTGGTTGT GCATCGTTTG
TTGGCGCAAG TTGTTCAGGT TCATCGCGGC TCAGCACAAA TCCGCGAACT GGCCGAATAT
CGAATTAACG AGCATGCTGT GCGAATTAGT GCCACGCGTG TGCCAAAGCA GATGCTGCCA
CTTGAGCCAC ATTTGCGCCA TGTGACCGTG CGAGCATTGG CGCGTGAGGA TGAACGGGTC
GCGCGTTTGT GTAATAGTCT GGGCTATTGG GAGCACTTGC GTGGCGTTTA TGGTGAGGCC
GAGCGCTGGT ATGAACGGGG CTTGGCGATT ATGCAAAAGG TCTTAGGGCC AGAGCATCAA
AATACTGCCC GCATGATGAA TAATTTGGCA GGTATTCGTT TGGAGCAAAT GCGCTATGCC
GAGGCGCAGG CCTTGTATGA GCAGGTTTTG GGGATTTGGA ATGTCACTTT TGGCCCAGAG
CATCCTGATA CCGCGCGATG TATGAACAAT CTGGCCTCGG CTTTAGGGCG ACAAGGACAG
AATGCCGAGG CCTTGGCGAT GCTTGAACAA GCATTGGTAG TTTGGGAAGC AGCCTTAGGC
CCAGAGCACC CCGATACCGC GATTAGTATC AACAATCTGG CGGTAGCCTT GGAGCGCGAA
GGGCGCTATG CCGAATCGCA GGTGTTACAG GAACGAGCAC TGAAGGTATG GAAAAAAACT
TTAGGGCCAG AGCATCCCGA TACTGCGGCA AGTTTGAACA GTTTGGCCCG CTTGTTGGAA
CATCAAGGCA AATATTCACA AGCTCTGCCA TTCTATCAAC AGGCGTTGGC AATTCGCGAA
ACCGCCTTGG GGCCAGAACA TCCCGACGTT GCTTCTAGCC TGAACGATCT GGCGGGATTG
CTGATCGAAC AAAAACGCTA TACTGACGCG CAGGCCTTGT ATGAACGGGC GCTGACGATT
CGTGAATTGG TGTTTGGCCC AGAGCATGCC GATACGATCA CTGCTATGGC AAATTTGGCG
GTGGCATTGG AGCGGCGCGG CCAATACCGC GAAGCGTTAG AGTTGCATGC CCAGGCATTG
ACCATTAGCC GAAAAGTTTT TGGCGATAAT CATCAGACGA GCCAACGGAT TCGTGCTAGC
CATGCCCGAA CCGTCCAAGC GATTCAAGAA GCCTTCGACC AATCGGCAGC CAAACGATCC
AGTGGCAAAC ATACCAACGA TGATCACGTT AAACAATGGA AGTAA
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| Protein sequence | MEMPALIGLL VDAVLAVSPA ADRLTIEAAF GAMLAGKPTL LDDAPLSLLI DQSSAQSHAT
IVYAGQTIAV ELAEPLDPLV VALAAVASLP LTTVPAPRAD QPAASRLPFE SSSTFVGREQ
ELLALAAALS HAQPTIVLPA VATGLGGIGK TSLVTEFAYR YGSYFHGGVF WINCADPEQV
ENQIAACAEA LAIDPTGLTL DAQVQHVLAA WQAPLPRLLI FDNCEDPVIL ERWMPTLGGC
RVLVTARNQL ATMSAIRLGV LAPAESRALL QQLCPRLTTA EAEAIAADLG HLPLALQLAG
SYLNTYDQQS VAQYRQDLAV THHSLKGGAG LPSPTRHEQD VEATFMLSLH QFDSANALEM
LALDMLDGAA WCAPGVPIPR QLVLDFVPDE TNAETALAAL QLLEQRGLID GSEALVVHRL
LAQVVQVHRG SAQIRELAEY RINEHAVRIS ATRVPKQMLP LEPHLRHVTV RALAREDERV
ARLCNSLGYW EHLRGVYGEA ERWYERGLAI MQKVLGPEHQ NTARMMNNLA GIRLEQMRYA
EAQALYEQVL GIWNVTFGPE HPDTARCMNN LASALGRQGQ NAEALAMLEQ ALVVWEAALG
PEHPDTAISI NNLAVALERE GRYAESQVLQ ERALKVWKKT LGPEHPDTAA SLNSLARLLE
HQGKYSQALP FYQQALAIRE TALGPEHPDV ASSLNDLAGL LIEQKRYTDA QALYERALTI
RELVFGPEHA DTITAMANLA VALERRGQYR EALELHAQAL TISRKVFGDN HQTSQRIRAS
HARTVQAIQE AFDQSAAKRS SGKHTNDDHV KQWK
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