| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3157 |
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| Symbol | |
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| ID | 5735029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3985844 |
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| End bp | 3986671 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280300 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001545922 |
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| Protein GI | 159899675 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00132801 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTAT TGGCCGAGAA AGTGGCGTTA ATTACTGGGG CTGGGCGTGG GATTGGAGCG
GCGGCAGCGC GATTGTTTAG CCAACACGGG GCGCGGGTAG TCTTGTGCGA TTTGGATGCT
GCGCCCGTTG AGCAATTAGC GGCTGAATTA AAAGCTGCTG GCGGCCAAGC CTTAGCGTTT
GCTGGCGATG TGACCAGTGC TGAATTTGCG CCGCAAGCAA TTGCCGCCAC TTTGGAGCAC
TTCGGCGGCT TAGATGTATT GGTCAACAAT GCTGGCTATA CGTGGGATGG CGTGTTGCAC
ACCATGGATG ATGCCCAATG GCAAGCCATG CTCGATGTGC ATTTATCGGC TCCCTTTCGG
CTGATTCGGG CAGCGGCTCC CTATTTGCGC GATACCGCCA AAGCCGAAAT TAAGGCTCAT
GGCGCGGCCA AAGCCCGTAA AATTATCAAT GTTTCTTCGG TTTCGGGCGT GTATGGCAAT
GCTGGGCAGG TCAATTATTC GGCGGCTAAA TCAGGTGTGA TTGGCCTAAC CAAAACTCTT
GCCAAGGAAT GGGGCCGTTT TAATGTCCAA ACCAATGCGG TTTGCTATGG CTTTATTGAA
ACTCGCTTGA CCGCTGCCAA AGAGCAGGGC GAGACGATTC AACGCGGCGA TCAGGCGATT
AAACTTGGTG TGCCCGAAAA TCTCATGGCT GGAATTACCA TGTTTCATCC CATGGGGCGG
GCTGGTACAC CGGAAGAAGC GGCTGGCCCG ATGGTCTTTT TAGCTTCGAG CTTGGCTAAT
TATGTGAACG GCGAAATTCT CGAGGTAACT GGTGGTATGG GGATTTAG
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| Protein sequence | MALLAEKVAL ITGAGRGIGA AAARLFSQHG ARVVLCDLDA APVEQLAAEL KAAGGQALAF
AGDVTSAEFA PQAIAATLEH FGGLDVLVNN AGYTWDGVLH TMDDAQWQAM LDVHLSAPFR
LIRAAAPYLR DTAKAEIKAH GAAKARKIIN VSSVSGVYGN AGQVNYSAAK SGVIGLTKTL
AKEWGRFNVQ TNAVCYGFIE TRLTAAKEQG ETIQRGDQAI KLGVPENLMA GITMFHPMGR
AGTPEEAAGP MVFLASSLAN YVNGEILEVT GGMGI
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