Gene Haur_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3125 
Symbol 
ID5734997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3943509 
End bp3944150 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID641280268 
Productisochorismatase hydrolase 
Protein accessionYP_001545890 
Protein GI159899643 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG ATCCATCCAC AACCGCACTG GTCTTGATTG AATTTCAAAA CGATTTCACC 
TCGGAAGGCG GGGCGCTCCA CGGTGCTGTT GCCGAAAGTA TGCAAGCTAC CAATATGCTG 
GCCAACGCGA TCGAAACGGT CAAACAAGCG CGTGAAGCAG GCGTGACGAT CATTCATGCG 
CCAATTTCAT TTGCCGAAGG CTACCGCGAA ATTACCAGCC ATCCCTATGG CATTCTCAAG 
GGCGTGGTCG ATAACAATGC CTTTCGCAAG GGCACATGGG GCGCAGAATT GGTCGATGTG 
CTGACCCCAG AAAGCAGCGA TATTGTGATC GAGGGCAAGC GTGGCCTCGA TACCTTCGCC 
AGCACCAACC TCGATTTTAT TTTGCGCAGC CGTGGCTTGA CCAACTTGGT TTTGGCGGGC 
TTTTTGACCA ACTGCTGCGT CGAATCGACC ATGCGCTCAG GCTATGAACG TGGCTACAAT 
GTCATCACTT TGACCGATTG CGTGGCCGCC ACCAGCGCCG AAGAGCAACA AGGCGCAATC 
AGCAAAGATT ATCCAATGTT CTCGCATCCC ATGGATCATC AGCAATTCCT CGAAATTTTG 
AGCGGACGCA GTGCCATGGT TAATGCTAGT CGCGGCTACT AA
 
Protein sequence
MQIDPSTTAL VLIEFQNDFT SEGGALHGAV AESMQATNML ANAIETVKQA REAGVTIIHA 
PISFAEGYRE ITSHPYGILK GVVDNNAFRK GTWGAELVDV LTPESSDIVI EGKRGLDTFA 
STNLDFILRS RGLTNLVLAG FLTNCCVEST MRSGYERGYN VITLTDCVAA TSAEEQQGAI 
SKDYPMFSHP MDHQQFLEIL SGRSAMVNAS RGY