Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3125 |
Symbol | |
ID | 5734997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3943509 |
End bp | 3944150 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280268 |
Product | isochorismatase hydrolase |
Protein accession | YP_001545890 |
Protein GI | 159899643 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATCG ATCCATCCAC AACCGCACTG GTCTTGATTG AATTTCAAAA CGATTTCACC TCGGAAGGCG GGGCGCTCCA CGGTGCTGTT GCCGAAAGTA TGCAAGCTAC CAATATGCTG GCCAACGCGA TCGAAACGGT CAAACAAGCG CGTGAAGCAG GCGTGACGAT CATTCATGCG CCAATTTCAT TTGCCGAAGG CTACCGCGAA ATTACCAGCC ATCCCTATGG CATTCTCAAG GGCGTGGTCG ATAACAATGC CTTTCGCAAG GGCACATGGG GCGCAGAATT GGTCGATGTG CTGACCCCAG AAAGCAGCGA TATTGTGATC GAGGGCAAGC GTGGCCTCGA TACCTTCGCC AGCACCAACC TCGATTTTAT TTTGCGCAGC CGTGGCTTGA CCAACTTGGT TTTGGCGGGC TTTTTGACCA ACTGCTGCGT CGAATCGACC ATGCGCTCAG GCTATGAACG TGGCTACAAT GTCATCACTT TGACCGATTG CGTGGCCGCC ACCAGCGCCG AAGAGCAACA AGGCGCAATC AGCAAAGATT ATCCAATGTT CTCGCATCCC ATGGATCATC AGCAATTCCT CGAAATTTTG AGCGGACGCA GTGCCATGGT TAATGCTAGT CGCGGCTACT AA
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Protein sequence | MQIDPSTTAL VLIEFQNDFT SEGGALHGAV AESMQATNML ANAIETVKQA REAGVTIIHA PISFAEGYRE ITSHPYGILK GVVDNNAFRK GTWGAELVDV LTPESSDIVI EGKRGLDTFA STNLDFILRS RGLTNLVLAG FLTNCCVEST MRSGYERGYN VITLTDCVAA TSAEEQQGAI SKDYPMFSHP MDHQQFLEIL SGRSAMVNAS RGY
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