| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3103 |
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| Symbol | |
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| ID | 5734975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3914930 |
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| End bp | 3915898 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280247 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001545869 |
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| Protein GI | 159899622 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATT TAGTGCGTCG GCGCTATTTA TGGTTTGCAA TTTCAATCCT GACAATTATT
CCAGGCTTGA TTAGCATGCT GGTATTTGGT TTGAACCTTG GGGTGGACTT CTCGGGTGGC
GCTCGCTGGG AAATTCATAT CCCAAGCATT AGCGAAACCC GCGATGGCTT AGAAAATGAT
GTCAATGCGG TGTTTGCTGA AAGCGGCATC GAAGGTGCAC GGACTCAGCT ATCACAAGGT
ACGACCAACA ATCAACAATT TGTGATCGCC TTTGTGCGCT CAAAGTCGGT GCAAAGCGAT
TCGGCTGAGC GTAAAGCAGT AGAAACTGGC TTGACCAGCA AGTTTGGTGC TGATACGCGG
ATCGAAACAG TGCAAACCGT CGGTGAAACC GTGCGTGGGC GCTCAATTCG CAATGCGATC
GTAGCTGTCT TTATTGCCTC ATTGGCGATC ATGGGCTATT TATGGGCGGC CTTCCGTGGC
ACTCCCAACC CCATTCGCTA CGGCGTGTGT GCAATCATCG CGATGTTGCA CGACGTGTTG
GTGGTGATCG GGATGGCTTC AATTCTCGGC TGGTTAATTG GCCTTGAAGT TGATGCGCTG
TTTATGACCG CCGTCTTGAC CGTGATTAGC TTCTCGGTCC ACGATACGAT TGTGGTGTTC
GACCGCGTGC GCGAAAACGT GCGCCGCTCA AGCGACGATT ACGAACGGGT GGTCAACCGC
TCGATCGTTC AAACCTTGAC GCGTTCGATC AACACCCAAT TTACCTCGTT CTTTACCTTG
ACCGCCTTGT TGTTGTTTGG TGGCGAAAGC ATTCGCTCGT TTGTTTTGAT TCTGTTGCTT
GGTTTGATCA GCGGTACCTA TTCGTCAATT TTCAACGCTG CCCAATTGTT GGTGGTGTGG
GAAAACCGCG AATGGCGCAA CTGGTTTGGT CGTGGCAAAG ATAAGGTTAA GCCAGCCACC
GCTGCCTAA
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| Protein sequence | MLDLVRRRYL WFAISILTII PGLISMLVFG LNLGVDFSGG ARWEIHIPSI SETRDGLEND
VNAVFAESGI EGARTQLSQG TTNNQQFVIA FVRSKSVQSD SAERKAVETG LTSKFGADTR
IETVQTVGET VRGRSIRNAI VAVFIASLAI MGYLWAAFRG TPNPIRYGVC AIIAMLHDVL
VVIGMASILG WLIGLEVDAL FMTAVLTVIS FSVHDTIVVF DRVRENVRRS SDDYERVVNR
SIVQTLTRSI NTQFTSFFTL TALLLFGGES IRSFVLILLL GLISGTYSSI FNAAQLLVVW
ENREWRNWFG RGKDKVKPAT AA
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