| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3087 |
|---|
| Symbol | |
|---|
| ID | 5734959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3894735 |
|---|
| End bp | 3897476 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641280231 |
|---|
| Product | NADH-quinone oxidoreductase, chain G |
|---|
| Protein accession | YP_001545853 |
|---|
| Protein GI | 159899606 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATA TGGTTACGTT GACGATTGAT GGGCAGACGG TCTCGGTGCC AAAAGGCACC
TTGGTCGTCG AAGCTGCCCG TCAAGTCGAA AATCTGATTC CGGTGTTCTG CTATCACCCC
AAAATGGCTC CCGTTGGCAT GTGCCGCATG TGTGTGGTCA AAGTGGGCAC GCCCAAGATG
GACCCCGCCA CCCGCCAGCC AGTCGTTGAT GCTGATGGCA AATCAGTGAT TGCGATGATG
CCACGCTTGC AAACCGCCTG TACCACGCCT GTCAGCGAAG GTATGGTTGT GGTTACTCAA
GATGCCGAAG TTGAGCACGC CCAACGTGGT GTTTTGGAAG CCTTGCTTAC TAGCCACCCA
CTCGATTGTC CAGTTTGCGA TAAGGGCGGC GAATGCCCAT TGCAAAACTT GACCATGGGT
TGGGGGCCAG GCAAAACCCG CTTCGACTAC AACGATAAAG TTCACTTCGA AAAGCCAGTG
CCACTGGGCG ATTTAATTTA CCTCGACCGC GAACGCTGTA TCTTGTGTGC TCGCTGTGTG
CGCTTCCAAG ATGAAATTGC TGGCGATCCG GTGCTTGGTT TCTACAATCG TGGCCGCGCT
TGGCATATCA TCTCACAATC CGACCCCGAA TTTGATAGCA AGTTCTCAGG CAACACCACC
GACATCTGTC CGGTAGGTGC GTTGACCTCA GCCGACTTCC GCTTCAAAGC CCGGGTTTGG
GAATTGCAGC CAATTCCAAC CGTTTGTAAC CACTGCTCGG TTGGCTGTAA CATGACCTTC
GATACCCGCT CGAACGAAAT CAAACGGGTG ATGCCCCGCG AAAACGATGC AGTCAATGAA
ATTTGGCTGT GTGATCGTGG ACGCTTCGGC CATCACTTCA CCAGCAGCCA GCAACGCCTG
ACCACGCCAT TGGTGCGCAA GGCCGGCAAA TTGCAAGAAG CCAGCTGGGA AGAAGCTTTG
ACCTTGGTTG CGCAACAACT TGATGGCATT CGCAGCACGA CTGGCGGCAA GGCCATCGGC
GGTTTGGCAG GCACATCGTT GGCCAACGAA GATCTCTACG CCTTCCAACG TTTCTTCCGC
GAAACGCTTG GCTCGGCTAA TCTCGATCAT CGCTCAGGCT CGGTCTTAGA CTTGCCGCTT
GATGATGTTG GCGCACTCTA TGGTATTCGC AGCGGTACTG ATCTTTCAAC GCTTGGCAAA
GGCACGGTTG TGCTGGTATT CGGCGCTGAT CCCGAAGAAG AAGCACCAGT TCATTTGTTG
CGGATTCGCG GCATCAACAC TCGTGGCGGC AGCGTGATTA CGCTCAATGG TCGCCCAACC
AAACTCGATA GCATCGCCAA GCAAGCTTTG CGCTACAAAT ATGGCAGCGA AAGCAGCGTG
TTGGCCGCTT TGCTCAAGCC ATTACTCGAT AGCACCCCAG CCGATGGCAA ACGTGCGACC
TTGCGTGGCT TCAACGATTT AGTTGCCGCA CTCAAAGGCT TCAATCTCGA TGAAAACGCC
AGCGGCATTA GCGCCGATAA GCTCAAAGCG GTCGCCGATT TGATTGGTGC TGCTGAAAAC
TTGGTGATTT TCTATGGCCG CGATGCCTTG ACGGCTGGCG CAAGTGTGCC TGCTGGCTTG
GCCAACCTCT TGGTGATGAC CCGCAAAGCT GGCGCTGCCA ATAGCGGATT GATCAGCCTG
CTCAAAGGCG CGAATGCCCG TGGCGCACTC GATTTGGGCG TGCGACCTGA TCGTGGGCCA
AATTATGCAG CCTTGAATAA TGCTGGGCTT GATGCCAAGC AAATGCTCAG CGCCGCCCGC
GATGGCAAAC TCAAAGCCTT GTATGTGGCT GGAGTTGATC CCGTTGGCGA TAATCCTGCT
GCCGCCGATA GCTTGAAGAA GCTTGATTTG TTGGTCGTGC AAGAATTGTT CTTGACCGAA
ACCGCCAAAA TGGCCGATGT GGTCTTGCCA GTCTTGAGCG TTGCTGAGCG CGAAGGTACT
TATACTAACG CTGAACGCCG CGTCCAACGC TTCCGACAAG CAATTCGCCC AACGCTGAAT
GCTCGCCCCG ACTGGCAAAT TTTGCAAGCC TTGGCCAACC AATTGGTTTC CGATGCGGTG
TTGAACGTGG CTGGTGGCGA TAAGAGCCGC AAGCAAGCTC GCCGCGAAGA AGATAAAGCT
CGCGTGCGTA CCGAATGGAA TTACGCTTCG CCAGCCGAAA TTCTGATGGA TATTCAGACC
AATGTGCCAA GCTACAAAGG TGTGAGCTAC GCCTCGATGC AAGGCCCAAC TGGCCAATGG
GGTCGCCAAG CCAACGAAAA TTACTACTTC GATGGCACTT CCTACCAAAA TACTGGTGGG
TTGGGTGTGC AATTACCAGC GGCAGTTGAA ACCAGCACAA CCTTGAGCTT GCAACCATTC
AGCATCAACA CCCCAGCTAG CGTTGCCGAC CGCCCATGGA CCTTGGTTGG CGCAACCTTC
TTGTATGATG ATGCTGGCTT GATGACCGAC ACAACCTTGT TGAGCAACCG CAAGGCTAAG
GCCGTGGCAG CGCTCAACCC AGTTGATGCC GACAAACTTG GGGTCAAAAA TGGCGAGCGG
ATCACCGTTA GCTCGGGCCG TGGCAGCCTC AGTTTGCCAG TTCACCGTAC CAAACTTGCG
CCCGAAGGCG TGGTAGTCGT ACCTGTTGGG GTTAATAATG TCGGCTTGGT CAGCGTCGTC
GAAGGTGGCG CAACGCCAGT AGCCATTCGA CGGGAGGCCT AA
|
|---|
| Protein sequence | MPDMVTLTID GQTVSVPKGT LVVEAARQVE NLIPVFCYHP KMAPVGMCRM CVVKVGTPKM
DPATRQPVVD ADGKSVIAMM PRLQTACTTP VSEGMVVVTQ DAEVEHAQRG VLEALLTSHP
LDCPVCDKGG ECPLQNLTMG WGPGKTRFDY NDKVHFEKPV PLGDLIYLDR ERCILCARCV
RFQDEIAGDP VLGFYNRGRA WHIISQSDPE FDSKFSGNTT DICPVGALTS ADFRFKARVW
ELQPIPTVCN HCSVGCNMTF DTRSNEIKRV MPRENDAVNE IWLCDRGRFG HHFTSSQQRL
TTPLVRKAGK LQEASWEEAL TLVAQQLDGI RSTTGGKAIG GLAGTSLANE DLYAFQRFFR
ETLGSANLDH RSGSVLDLPL DDVGALYGIR SGTDLSTLGK GTVVLVFGAD PEEEAPVHLL
RIRGINTRGG SVITLNGRPT KLDSIAKQAL RYKYGSESSV LAALLKPLLD STPADGKRAT
LRGFNDLVAA LKGFNLDENA SGISADKLKA VADLIGAAEN LVIFYGRDAL TAGASVPAGL
ANLLVMTRKA GAANSGLISL LKGANARGAL DLGVRPDRGP NYAALNNAGL DAKQMLSAAR
DGKLKALYVA GVDPVGDNPA AADSLKKLDL LVVQELFLTE TAKMADVVLP VLSVAEREGT
YTNAERRVQR FRQAIRPTLN ARPDWQILQA LANQLVSDAV LNVAGGDKSR KQARREEDKA
RVRTEWNYAS PAEILMDIQT NVPSYKGVSY ASMQGPTGQW GRQANENYYF DGTSYQNTGG
LGVQLPAAVE TSTTLSLQPF SINTPASVAD RPWTLVGATF LYDDAGLMTD TTLLSNRKAK
AVAALNPVDA DKLGVKNGER ITVSSGRGSL SLPVHRTKLA PEGVVVVPVG VNNVGLVSVV
EGGATPVAIR REA
|
|---|
| |