| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3082 |
|---|
| Symbol | |
|---|
| ID | 5734954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3890993 |
|---|
| End bp | 3892261 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280226 |
|---|
| Product | NADH dehydrogenase I, D subunit |
|---|
| Protein accession | YP_001545848 |
|---|
| Protein GI | 159899601 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGC ACGCACATGC GTATCCCGAT ATTGAAATTC CAACACCTTC GCAAATTGCG
GCGGTGGCAT TAAATAACGA GCCTGATGAA AACGGCGAGC AATCCATGGT GCTCAGCATG
GGGCCACAAC ACCCTTCAAC GCACGGGGTG CTACGGCTAG CCGTCGAACT CAATGGCGAA
AACGTGGTGC AACTGGCTCC CGACGTGGGC TTTTTGCACA CCGGCATCGA AAAAACCATC
GAAACCAAAA CCTACACCAA ATCAATTGTG CTGACCGACC GCATGGATTA CCTTGCGCCG
ATGTCGAACA ATATGGTGTA TGTGGCGGCG ATTGAAAAAT TGATGCAGCA AGATGTGCCA
GAACGCGCCC AAACCTTGCG GGTGTTGTTG CTGGAACTGA CGCGGATCAA CTCGCACTTG
GTTTGGTTGG GCACGCACGC GCTCGACTTG GCCGCGATGA GTGTGTTTTT TTATGCAATG
CGTGAACGTG AGTATATTCT CGATATTTTC GAGATGCTGA CTGGCGCACG TATGATGACC
AGCTATTTCC GCGTTGGTGG TTTGGCATGG GATATTCCAG CCGACTTTAT TCCAACTGTG
GAAGATTTCT TGACCCACTT TTTGCCCAAG GTCGATGAAT ATGAAGATTT GTTGACCAAT
AACTTGTTGT GGAAACAACG CACCAAGGGC GTAGGCGTGG TCAATGCTGC TGATGCAATT
GCCCTCGGCT TGTCGGGCGC GAACCTACGG GCCAGCGGTG TCGATTGGGA TTTGCGCAAA
ACCATGCCCT ACAGCGGCTA CGAAACCTAC CAATTCGATG TACCAGTCGG CCAAGCTGGC
GATATTTACG ATCGCTATCG CTGTCGGGTG CAAGAAATGC GCGAAAGCGT CAAGATTGCC
CGTCAAGCGA TCGAACGCGT CAAGCAAATG CATGGCCAGC CCTATGTGAC CGAAAATCGT
AAGGTTGCGC CACCACCCAA GAGCGAAATT ACCTACAGCA TGGAATCGCT CATTCACCAC
TTTAAGCTGT GGACGGAAGG CTTCCGCCCA CCGCGTGGTT CGGCCTATGC GGCAATCGAA
TCACCACGAG GTGAAATTGG CTGTTATGTG GTGAGCGATG GCACTCCCAA ACCATGGCGT
GTCCACTTCC GCGCACCGTC ATTTATTAAT TTGCAAGCCT TGCCCCACAT CGCCAAAGGC
AAATTGATGG CCGACTTGGT GGCATTGATT GCGAGCATCG ATCCGGTGCT TGGTGAAGTG
GATCGTTAA
|
|---|
| Protein sequence | MVMHAHAYPD IEIPTPSQIA AVALNNEPDE NGEQSMVLSM GPQHPSTHGV LRLAVELNGE
NVVQLAPDVG FLHTGIEKTI ETKTYTKSIV LTDRMDYLAP MSNNMVYVAA IEKLMQQDVP
ERAQTLRVLL LELTRINSHL VWLGTHALDL AAMSVFFYAM REREYILDIF EMLTGARMMT
SYFRVGGLAW DIPADFIPTV EDFLTHFLPK VDEYEDLLTN NLLWKQRTKG VGVVNAADAI
ALGLSGANLR ASGVDWDLRK TMPYSGYETY QFDVPVGQAG DIYDRYRCRV QEMRESVKIA
RQAIERVKQM HGQPYVTENR KVAPPPKSEI TYSMESLIHH FKLWTEGFRP PRGSAYAAIE
SPRGEIGCYV VSDGTPKPWR VHFRAPSFIN LQALPHIAKG KLMADLVALI ASIDPVLGEV
DR
|
|---|
| |