Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3064 |
Symbol | |
ID | 5734936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3870096 |
End bp | 3870875 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641280208 |
Product | hydrolase |
Protein accession | YP_001545830 |
Protein GI | 159899583 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458 [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.852724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTC GCGGATGTTT AATTGATCTT GATGGCACGA TTTATAGCGC TGGCACACTT ATCGAGGGGG CGGTGGCAGC AATCGAGCAA TTACGGGCAG CTGGCTATCA ATTGTTATTT TTAACCAACA CCGATTCACA ATTGCCCGAA ACTTTGGCGG CCAAACTCCA AGCCCGCCAA ATCCCGATCC AAGCGCATGA AATTATGAAT CCGCTGCAGG CGATTGCTAC CTATCTCGCC AATACCGACC CTAATTTGTA CATTTTGGCT CCGCGAACGG TTAAAACATG GCTTGAACAG CAGTATCCGC CTAAGGCTGA TCAACCAGTG AGCCATGTGG TGTTGGCGCA TTGTGGCGAG GTTGATGGCT ATGCAAGCCT CAACGTGGCC TTTCGGCATC TGTTGCAGGG AGCTGAATTT TTAGTGAGTC AGCCTGGCCG CAATTATTTA AGCAATACGG GGTTGAATCT TGATACTGGA GCGTTTGCGG CCTTGCTGGA ATATGCCAGC CAAATAGCGC CAACAATTTT GGGCAAACCC ACAAAAACGT TTTTTGAGCA GGCGATGCAA GCCTTGAATT TGTCGGCAGA TGAAGTTGTG GTGGTCGGCG ATGACTTAAC GACTGATATT GTGGGGGCAG CAAACAGTGG GATGGCAAGT GTCTGGTTGC GCACAGGCAA GGGTCAGGAT CAAACCTTAA TCCCCAGCAT GGCGCAACCA ACATGGGTTT TAGCCAGTAT TGCCGAATTG CCCGCACTGT TGGCAGAAGT TAATCGCTAA
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Protein sequence | MPIRGCLIDL DGTIYSAGTL IEGAVAAIEQ LRAAGYQLLF LTNTDSQLPE TLAAKLQARQ IPIQAHEIMN PLQAIATYLA NTDPNLYILA PRTVKTWLEQ QYPPKADQPV SHVVLAHCGE VDGYASLNVA FRHLLQGAEF LVSQPGRNYL SNTGLNLDTG AFAALLEYAS QIAPTILGKP TKTFFEQAMQ ALNLSADEVV VVGDDLTTDI VGAANSGMAS VWLRTGKGQD QTLIPSMAQP TWVLASIAEL PALLAEVNR
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