Gene Haur_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3064 
Symbol 
ID5734936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3870096 
End bp3870875 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content50% 
IMG OID641280208 
Producthydrolase 
Protein accessionYP_001545830 
Protein GI159899583 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.852724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTC GCGGATGTTT AATTGATCTT GATGGCACGA TTTATAGCGC TGGCACACTT 
ATCGAGGGGG CGGTGGCAGC AATCGAGCAA TTACGGGCAG CTGGCTATCA ATTGTTATTT
TTAACCAACA CCGATTCACA ATTGCCCGAA ACTTTGGCGG CCAAACTCCA AGCCCGCCAA
ATCCCGATCC AAGCGCATGA AATTATGAAT CCGCTGCAGG CGATTGCTAC CTATCTCGCC
AATACCGACC CTAATTTGTA CATTTTGGCT CCGCGAACGG TTAAAACATG GCTTGAACAG
CAGTATCCGC CTAAGGCTGA TCAACCAGTG AGCCATGTGG TGTTGGCGCA TTGTGGCGAG
GTTGATGGCT ATGCAAGCCT CAACGTGGCC TTTCGGCATC TGTTGCAGGG AGCTGAATTT
TTAGTGAGTC AGCCTGGCCG CAATTATTTA AGCAATACGG GGTTGAATCT TGATACTGGA
GCGTTTGCGG CCTTGCTGGA ATATGCCAGC CAAATAGCGC CAACAATTTT GGGCAAACCC
ACAAAAACGT TTTTTGAGCA GGCGATGCAA GCCTTGAATT TGTCGGCAGA TGAAGTTGTG
GTGGTCGGCG ATGACTTAAC GACTGATATT GTGGGGGCAG CAAACAGTGG GATGGCAAGT
GTCTGGTTGC GCACAGGCAA GGGTCAGGAT CAAACCTTAA TCCCCAGCAT GGCGCAACCA
ACATGGGTTT TAGCCAGTAT TGCCGAATTG CCCGCACTGT TGGCAGAAGT TAATCGCTAA
 
Protein sequence
MPIRGCLIDL DGTIYSAGTL IEGAVAAIEQ LRAAGYQLLF LTNTDSQLPE TLAAKLQARQ 
IPIQAHEIMN PLQAIATYLA NTDPNLYILA PRTVKTWLEQ QYPPKADQPV SHVVLAHCGE
VDGYASLNVA FRHLLQGAEF LVSQPGRNYL SNTGLNLDTG AFAALLEYAS QIAPTILGKP
TKTFFEQAMQ ALNLSADEVV VVGDDLTTDI VGAANSGMAS VWLRTGKGQD QTLIPSMAQP
TWVLASIAEL PALLAEVNR