Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3063 |
Symbol | |
ID | 5734935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3869680 |
End bp | 3870099 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641280207 |
Product | thioesterase superfamily protein |
Protein accession | YP_001545829 |
Protein GI | 159899582 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.530863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT TGCCTGATGT AAGCGCAATG AACGAGTTTC AACGCGGCAC ACTTGCAGAC ACGCTTGGAA TTAGCTTTAC CGAAGTCAGT TTGGATCGCG TAGTAGCAAC CATGCCAGTT GAGCGCAAGG TGCATCAACC ATTTGGCTTG CTGCACGGCG GAGCATCGGT TGTTTTGGCC GAATCGCTGG CCTCGGTGGC TGGTTGGGCC AATGTGATGC ACAACAATCA ATTGGTGGTT GGGGTCGAAA TCAACGCTAA CCATCTGCGC TCAATCCGCA GCGGCGTGGT AACCGGAGTA GCCACACCAC TACATCGTGG GCGGCGCACC CAAGTTTGGG AAGTACGAAT TAGTGATGAG CAAGATCGCT TGATCTGTGT GTCGCGCTGT ACGGTGGCCG TGGTTGACGC TGAGGCTTAG
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Protein sequence | MTDLPDVSAM NEFQRGTLAD TLGISFTEVS LDRVVATMPV ERKVHQPFGL LHGGASVVLA ESLASVAGWA NVMHNNQLVV GVEINANHLR SIRSGVVTGV ATPLHRGRRT QVWEVRISDE QDRLICVSRC TVAVVDAEA
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