| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3047 |
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| Symbol | |
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| ID | 5734919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3848637 |
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| End bp | 3849203 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280191 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001545813 |
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| Protein GI | 159899566 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.495668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGCTT TTCAACCTAG CAACCAAGAA TTAAATGAAG CTAGTCTGGT TGCTGGGTTG
CGCCAGCGCG ACGATGCAGC CTTTAATTAT TTTTTGCAAA CCTTCGCACC ACAGCTGCAA
CGCTTAGCTC GGCGCTATGT TTACTCCGAT GATGAAGCTG ATGATATTGT GCAAGAGAGT
TTTATTCGCG CGGCTGAGCA CATCAATCGT TTTGAAGGCC GTAGTAGCCT TGGCACATGG
CTGCATCGTA TTACGATCAA CGCTGCGCTC GATTATCGCC GTCGCCAACG ACCCCAAACC
AACTTGAATG AACTCGATGA GCGAATGAGT GTTAGCGATT TGGGCGATGC CACGCTTTCG
GCTGAATTAA GCCAATATAT TTATGCAGCA CTGGAAACGC TGCCAACCCG CCAACGCATG
GCGATCAATT TGTGTTATTT GCAAGGAATG ACTGCCCAAG AGGCCTCATG CTCTTTGGGG
ATTAGCCCCG ACACCGTGTA TGGCTATTTG CAACAAGCCT ACCCCACCTT GCGTCGCGCC
TTGGCCTGCT ACATGGCCGA AGCGTGA
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| Protein sequence | MLAFQPSNQE LNEASLVAGL RQRDDAAFNY FLQTFAPQLQ RLARRYVYSD DEADDIVQES
FIRAAEHINR FEGRSSLGTW LHRITINAAL DYRRRQRPQT NLNELDERMS VSDLGDATLS
AELSQYIYAA LETLPTRQRM AINLCYLQGM TAQEASCSLG ISPDTVYGYL QQAYPTLRRA
LACYMAEA
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