| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3030 |
|---|
| Symbol | |
|---|
| ID | 5734887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3827021 |
|---|
| End bp | 3827779 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641280174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001545796 |
|---|
| Protein GI | 159899549 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.248633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGGC ATACAAAATG GCATGAAATC CGCCGCAAAA AAGGGGTTCT TGATCAACGC
CGAGGCCAAC GCTGGACGAA AATCGCTCGT GATATTACGA TCGCCGCCCG CGAAGGTGGT
GGCAGCCCCG ACATGAACTT CCGGCTGCGC TTGGCGATTG AAAAAGCCAA AGCCGATAAT
ATGCCAGCGG ATAATATTCA ACGAGCAATT GATCGCGGCA CTGGCGTAAG CGGTGAAGCA
GCGCTCGAAG AAGTCACCTA CGAAGGCTAT GGCCCAGGTG GCATTGCCGT TATTGTCGAT
GCTGCCACTG ACAATCGTAA CCGCACCGTT TCGGAAATTC GCACCGCCTT TAACAAAAAT
GGCGGCACGC TTGGCGAAGG CGGTTCAGTC GGTTGGATGT TTGATATCAA AGGTTTGATC
AGTATTGATC GGACTGAAAA AACCGACCCC GATGAAGTAA CCTTGCTGGC GATCGATGCC
GATGCTGATG ATGTAATTGT CAACGATGAT GCAATTATTG TTTACACTGA ATTTAGCAAA
TTGGCGGCGG TGCGCGATGC GCTCAACGAG CAAGGCCTAA AAATCAGCAC TGCTGAAAAA
ACCATGCTCG CCAAAACAAT CATGGAAGCC GATGAAGCGA CCACCTTCCA GATTTTGCGG
CTGATGGAGC GGCTCGAAGA TCTCGATGAT GTCCAAAAAG TCTATAGCAA CCTAGAAGTA
TCCGATGAAT TAGCCGAAAA ATATGCCGAA CAAGGCTAG
|
|---|
| Protein sequence | MSGHTKWHEI RRKKGVLDQR RGQRWTKIAR DITIAAREGG GSPDMNFRLR LAIEKAKADN
MPADNIQRAI DRGTGVSGEA ALEEVTYEGY GPGGIAVIVD AATDNRNRTV SEIRTAFNKN
GGTLGEGGSV GWMFDIKGLI SIDRTEKTDP DEVTLLAIDA DADDVIVNDD AIIVYTEFSK
LAAVRDALNE QGLKISTAEK TMLAKTIMEA DEATTFQILR LMERLEDLDD VQKVYSNLEV
SDELAEKYAE QG
|
|---|
| |