| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3027 |
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| Symbol | |
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| ID | 5734884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3822786 |
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| End bp | 3824246 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280171 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_001545793 |
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| Protein GI | 159899546 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00722625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAC TACTCGACAT TGAAACAACC CTCATCCGCG ATGGTCGCCT CGCATCGGCA
GCATGTTTGG TGGTGGCGGT TTCAGGTGGC CCGGATTCAC TAGCCTTGCT GCATCGGTTG
ACGGCCTTGG CCACACCTTA TGGCTGGCGT TTGCATGTGG CCCACCTTGA TCATGGCTTG
CGTGGCGAGC AATCAGCTGC CGAGGCCGCT TTTGTGGCCG AAATTGCCGC TGATTGGGGC
TTAACTGCCA CAATTGAGCT GCGTGATGTT GACCAAGTTG CCAAACAATA TCATGTGGGC
TTGCCTGCTG CGGCCCGAGC GACCCGCTAT CGTTTTTTGG CTGAGGTGGC TTTGCAGCAA
CAAGCCGATG CGGTCGTACT CGGCCATCAA TCCGATGATC AAGCAGAAAC GGTGTTGTTG
CATGTGTTGC GGGGCACAGG CCCGAGCGGC TTGAGCGCGA TGCGACCACG CACCGAGTGG
GTTGGCTGGC GAGTTACCGC AGGAATGCCC CATCAAGCAG TTGGGCCAGC TTTGATTCGT
CCGATGCTCA ATATTACCCG CGACGAAATT GAGGCCTATT GCGATGAACA GCAATTGGAG
CCACGCCGCG ACCCAACCAA TAATTCATTG GAATATACGC GGGGCCGCAT TCGCCATCAA
TTATTGCCAT TGCTCGGCGA ATACAATGCG AAAGTTGTTT CGGCCTTGGC GCGAACGGCC
CGTTTAGCGG CGATTGAAAC CGACTACATG CAAAGCGAGC TTGATCGTCA ATGGCAACAT
TTAATTGAGT TTGAGCCAGG GGCGATTACC TTTCATCGTG AGCAATGGAA CCACATGCAT
CCAGCGTTGC AGCGCCATGC AATTCGCCGC GCGGTTTATT TATTGCGGCC TGAGCGCGAC
GAATTAACAT CCTCGCAGCT TGACCATGCG TTAAGTGCCA TGAACAGCCT GCAACTGTTT
TGCCAAATGC CGCATAATTT GGTCTTGCAT CGCAAGCCAC ATGGTTGGAC AATGACCGTA
GCTACGACTA TGCAGCCAAC CAACGACGAA CCGCAATTGA GCATCGATGA GTGGCCGCTC
AATCAACAAG GCATGACTCC GTTGCCCGAT GAACGTTGGC GGGTGATTAT GGAGCTGATG
CCCAGCCGCC CTGAATATAA TCTTTCGCGC TGGCAAGGCT TGCTCGATGC CAACGCAATT
CAAGGCAGAT TGATGTTACG TCAACGCCGC CCAGGCGATC GCATGCGGCC CGCAGGTGGC
ATTGGCTCAC GGCGCATCCA AGATATTATG GTTGATATGC GTTTGCCACG CGAACTGCGT
GCCCAATGGC CGTTATTCGT TGATGATGTT GGGATACTTT GGATTCCTGG CTTGCTGATG
GCCGAACATG CCCACCCAAC GCCAGAAACA ACCAACTTTT TGCTCATAAC TTTGGAGGAT
ACTCACGCCG ATGCATCCTG A
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| Protein sequence | MSQLLDIETT LIRDGRLASA ACLVVAVSGG PDSLALLHRL TALATPYGWR LHVAHLDHGL
RGEQSAAEAA FVAEIAADWG LTATIELRDV DQVAKQYHVG LPAAARATRY RFLAEVALQQ
QADAVVLGHQ SDDQAETVLL HVLRGTGPSG LSAMRPRTEW VGWRVTAGMP HQAVGPALIR
PMLNITRDEI EAYCDEQQLE PRRDPTNNSL EYTRGRIRHQ LLPLLGEYNA KVVSALARTA
RLAAIETDYM QSELDRQWQH LIEFEPGAIT FHREQWNHMH PALQRHAIRR AVYLLRPERD
ELTSSQLDHA LSAMNSLQLF CQMPHNLVLH RKPHGWTMTV ATTMQPTNDE PQLSIDEWPL
NQQGMTPLPD ERWRVIMELM PSRPEYNLSR WQGLLDANAI QGRLMLRQRR PGDRMRPAGG
IGSRRIQDIM VDMRLPRELR AQWPLFVDDV GILWIPGLLM AEHAHPTPET TNFLLITLED
THADAS
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