Gene Haur_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3016 
Symbol 
ID5734903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3809624 
End bp3811156 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content49% 
IMG OID641280160 
Productanti-sigma-factor antagonist 
Protein accessionYP_001545782 
Protein GI159899535 
COG category[T] Signal transduction mechanisms 
COG ID[COG3322] Predicted periplasmic ligand-binding sensor domain 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000586353 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCTG CGCCATCAAC TGGCACGACC TCGCTGCGTC GCCAAACCAA AATTGTGCTA 
GGAGCCAGCC TCGTGCTGCT GGTAGCGGTA CTCATTTTTC CGCTGCGTAT CTTGTTGCTC
CAATCGTTTG CCGAGCTAGA AACAACCTCA ATGCAAACCG ACCTTGATCG GGTGTTGAAT
GCTTTGCAGT TTGAGCAAAA TCGCCTCGAC ACGGCCTTGG TTTCATGGTC AACCTGGGAT
GATACGTATG CCTTTATCGA GGCTCCCGAT GCTGATTACA TTAGCAACAA TGCTGGCGAT
GATGTTTTCG CGACCTATAA ATTTAATATT ATGGCCTTTC TCAACCAGCA ACAAGCCTTG
GTGTATGGAC GAATGGCCGA GGCAGATACA TTTAATGATT TACCAGCAAA CTTTTTGCCA
TTTGTGCAGC AAATTCCGCA ACTAACGACG TTTAGTGACC CCAGCCAACG TAATTTAGGC
ATTGTACGTT TTCAAGAGCG CATTGTCTTG GTTGCTGCCC GCCCGATTAT TGATAGCCAA
GGCCAAGGGC CAATTCGCGG CACAGTGATT TTTGGGCGCT ATCTTGATCA ACAGGTGCTT
AATGATTTAG CTGCGGTCAC TCTATTTCCT TTCAGCTTGG AAGATGTGCT GAATCCACCA
AGCGATCTGA CAAGCAGCAT TCAGCAATTG AGTGATGTCA ATCCCCGCCA AATCATCCCA
ATCGATGAGC ATGCCTTGCG TGGCTTACAG CAAATCAACG ATCTCCAAGG CAACCCAGCC
CTGATTATCA ACATTATTCG GCCACGCACA ATCTACAACC AAGGCCATCA TGCCTTGCAG
TTTGTAGTAA TTTTGACCTT TCTGGTAACC GCAGTTGGTG GCTTTGTGTT GTACTTTTTG
CTCAATCGAG TGGTCATCAG CCGTGTGTTG CGCTTGAGCA GCGAAATCAA ACACGTTGCC
AATAATCTGA ATGAACGGGT AGCAGTGGTG GGCAACGATG AGGTTGCGGG TTTGGCGACC
AGCATTAATC AAACCTTGAA TGTGCTCGAA CAAGCGCAAC GAGCAACCGC AGCCGCTGAA
GCCGAGCGCA ACCAACTGCA AGCGAATACC CTGGCAGCCC AAACTGAACA ACTAGCACTC
CAAGAGCAAT TAATCAAAGC CCAAGAATTT GTAATCGCCG AACAAGCTAC ACCGTTGATT
CCCTTCCGCG ATGATATGTT GGTGATGCCC TTGGTCGGCG CGATCGATCA GGCACGGGCT
AACCACATTT TGGGCACATT ATTGCAAGGA GTTGAGCAAC AACGCGCTCG GATCGCGATC
ATCGATATTA CTGGAGTCGC TCAAATTGAT GGCTTTACCG CCGAAATGTT GCTCAAGGCC
GCCAAGGCTG TGCGCTTGCT TGGTGCTCAA TTGGTGCTAA CCGGCCTCAG CCCAGAGATT
GCTCAATCGT TAGTTGCCTT CGGCCAGCAG TTGAACCAAC TTACTACATT TAGCAGCTTG
CAGGCAGGCA TTGCTTGGAG TATTCGGCGC TAA
 
Protein sequence
MTSAPSTGTT SLRRQTKIVL GASLVLLVAV LIFPLRILLL QSFAELETTS MQTDLDRVLN 
ALQFEQNRLD TALVSWSTWD DTYAFIEAPD ADYISNNAGD DVFATYKFNI MAFLNQQQAL
VYGRMAEADT FNDLPANFLP FVQQIPQLTT FSDPSQRNLG IVRFQERIVL VAARPIIDSQ
GQGPIRGTVI FGRYLDQQVL NDLAAVTLFP FSLEDVLNPP SDLTSSIQQL SDVNPRQIIP
IDEHALRGLQ QINDLQGNPA LIINIIRPRT IYNQGHHALQ FVVILTFLVT AVGGFVLYFL
LNRVVISRVL RLSSEIKHVA NNLNERVAVV GNDEVAGLAT SINQTLNVLE QAQRATAAAE
AERNQLQANT LAAQTEQLAL QEQLIKAQEF VIAEQATPLI PFRDDMLVMP LVGAIDQARA
NHILGTLLQG VEQQRARIAI IDITGVAQID GFTAEMLLKA AKAVRLLGAQ LVLTGLSPEI
AQSLVAFGQQ LNQLTTFSSL QAGIAWSIRR