| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3002 |
|---|
| Symbol | |
|---|
| ID | 5734874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3791145 |
|---|
| End bp | 3791852 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641280146 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001545768 |
|---|
| Protein GI | 159899521 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAT TGCAAAATGT ACATACCTAT TACGGCAACA TTCATGCGCT CAAGGGCATT
TCGCTGGAGA TTAATCAAGG CGAGATTGTG ACCCTAATTG GCTCGAATGG CGCTGGGAAA
AGCACAACCC TGCGGACGAT CTCCGGCATT ACGCCGCCTC GCACAGGTCA AGTGCTGTTT
GAAGGCAAGC CGCTCAATGG TGTACCCGCC CATAAAATTG TTTCGCAGGG CATTTCGCAA
TCGCCTGAAG GTCGGCGGAT TTTTGCCAAC CTCACCGTGC GCGAAAACTT AGAAATGGGC
GCATTCACCC GCAACGATAA AGCTGAAATT GCCAGTGACA TGGATCGGGT GTTTGAGCTG
TTTCCCCGCT TGAAGGAGCG AGTTGTCCAG CGCGGCGGCA CGCTCTCTGG CGGTGAGCAG
CAAATGTTGG CAATTGGCCG CGCTTTGATG TCACGCCCTC GTTTGCTGTT GCTCGATGAA
CCATCGATGG GATTAGCTCC AGTGTTGGTT GACCTGATTT TTGAAATTAT TCAAAATATC
AACAGCCAAG GCACAACCAT TTTGGTGGTT GAGCAAAACG CTTTGATGGC GTTAGGAATT
GCCCATCGAG CCTATGTGCT GCAAACTGGG GCAATTGTTA AGGCAGGCGA TGCCGCAACT
TTGCGCGAAG ATGAAGATGT ACAAAAGGCC TACTTGGGGA TGGAATGA
|
|---|
| Protein sequence | MLQLQNVHTY YGNIHALKGI SLEINQGEIV TLIGSNGAGK STTLRTISGI TPPRTGQVLF
EGKPLNGVPA HKIVSQGISQ SPEGRRIFAN LTVRENLEMG AFTRNDKAEI ASDMDRVFEL
FPRLKERVVQ RGGTLSGGEQ QMLAIGRALM SRPRLLLLDE PSMGLAPVLV DLIFEIIQNI
NSQGTTILVV EQNALMALGI AHRAYVLQTG AIVKAGDAAT LREDEDVQKA YLGME
|
|---|
| |