| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2993 |
|---|
| Symbol | |
|---|
| ID | 5734865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3780514 |
|---|
| End bp | 3781578 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280137 |
|---|
| Product | saccharopine dehydrogenase |
|---|
| Protein accession | YP_001545759 |
|---|
| Protein GI | 159899512 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAA TCGTTATTTT GGGTGGTTAT GGCGTGGTTG GTTCGCAAAT TGCCCAGATT
TTGCGCCAGA GTCACCCTGA TCTGCCGTTG ATTTTGGCGG GGCGTAATCC ACAGCAAGCC
CAGCAATTGG TTGCCGAACT TGGCGGGCCA ACCAGCGCGG CGGCGATCGA TGTGCTCAAG
CCGCAACCAT TGGCGGGGTT GCAACCACAG GCGATTATCA ATGCTGTCAA TGACCCGCAT
GATTATGTGT TGCAAGAAGC AGTGGCCCGT GGGATTCCTA TGGTTGATAT CACCCGTTGG
ACATCACGTT TACAACAAAC CTTGGATAGG ATTGATCGCA ACACCCTGAA GGCTCCATTG
CTGTTTGCCT CGCATTGGAT GGCGGGCTTG GCTAGTGTGG TGGCGTTTGC AGCAACCCAG
CAATTAGCCC AAACCGAACA GATGGATTTG CATGTGCTGT TTTCGCTCAA AGATAAAGCT
GGGCCAAATT CAATTGAATA TATGGAGCAT ATTGCTACGC CGTTTACCAT CACTGAGAAA
CATCAGCCAC GTGAGGTTTA CCCCTATACC GAGCCGCAAA CTGTGACTTT TCCCAATGGT
TATCGCGCCA AAACTTATCG CTTTGATACG CCTGATCAAT GGACATTGCC GCAAAGCACC
AAGGCTGCGA GTGTTTCGGC CCGCATCACC TTTGATGATC GTTTGACCAT GGGTTTGTTG
TTGGGCTTGG CGCGTTCTGG CGTGTGGAAA TTGTTGATGC ATCGGCGCTT TGATCGTTTG
CGCCATGCCT TGCTCTACAA TCCTGGCACG GGTGCGGCGC ATGAATTGGT GTGGCAGATC
AGCGGGCGTG ATCATGCTGG CAAAGCCCAG CAATTGACCA AAACAATTGT TGATCGCCAA
GGCCAAACTC ATCTGACGGC AGTGGGTGCG GTGATTCAGC TTGAAACAAT GTTGGGGCTA
GATGGCAGCC AAGCATTTGC GCCAGGCATT TATTTTCCTG AGACAGCGCC GAAATTGGCC
TATGCTTTGG GGCGGATGCA GCAGCTTGGG GTGGAATTAA ATTAA
|
|---|
| Protein sequence | MQAIVILGGY GVVGSQIAQI LRQSHPDLPL ILAGRNPQQA QQLVAELGGP TSAAAIDVLK
PQPLAGLQPQ AIINAVNDPH DYVLQEAVAR GIPMVDITRW TSRLQQTLDR IDRNTLKAPL
LFASHWMAGL ASVVAFAATQ QLAQTEQMDL HVLFSLKDKA GPNSIEYMEH IATPFTITEK
HQPREVYPYT EPQTVTFPNG YRAKTYRFDT PDQWTLPQST KAASVSARIT FDDRLTMGLL
LGLARSGVWK LLMHRRFDRL RHALLYNPGT GAAHELVWQI SGRDHAGKAQ QLTKTIVDRQ
GQTHLTAVGA VIQLETMLGL DGSQAFAPGI YFPETAPKLA YALGRMQQLG VELN
|
|---|
| |