Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2991 |
Symbol | |
ID | 5734863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3777709 |
End bp | 3779388 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280135 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001545757 |
Protein GI | 159899510 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.187094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATAACA AAGTTATCTA CTCGATGATT CGGGTGAGCA AAATTCATCC GCCGAATAAG CAAGTTTTGA AGGATATTTC GTTATCCTAT TTTTATGGTG CAAAAATTGG CGTACTCGGG GCGAATGGCT CGGGTAAATC CAGCCTGTTG CGCATTTTGG CGGGCGTTGA TCAAGAGTTT CAAGGCGAAA CGGTTTTAGC GCCAGGCTAT ACCATCGGCT ATCTTGAGCA AGAACCCCAA CTTGATGCCA GCAAAACGGT GCGCCAAATC GTTGAAGAAG CAGTCAAACC CGTCGTTGAT GCCTTGCGCG AATACGATGA AATCAACGCT AAATTCGGCG AATCCATGAG CGACGACGAG ATGGATGCGC TGATCCAACG TCAAGGCGAG GTGCAAGATA AGCTTGACCA AATGAATGCC TGGGATTTGG ATAGCCGCCT CGATTTCGCC ATGGATGCCT TGCGCTGCCC TCCATCGGAT ACGCCAGTTG AGGTGCTTTC TGGTGGCGAA CGCCGCCGCG TGGCGCTCTG TCGGCTGTTG CTCGAAGAGC CAAGCATTTT GCTGCTCGAC GAACCAACCA ACCACCTTGA TGCCGAATCG GTGGCTTGGC TCGAAAAGCA CTTGCAAGAA TATCCTGGTA CAGTCATCGC GGTTACCCAC GATCGCCACT TTTTAAATAA TGTGGCTGGC TGGATTTTGG AGCTTGATCG TGGGCAGGGC ATTCCGTGGA AGGGCAATTA TTCGTCGTGG CTTGAGCAAA AACAACAACG TCTAGCCAAC GAAGAAAAAG CCGAATCACA ACGCCAAAAA ACCCTCCAAC GCGAGTTGGA TTGGATTAAC ATGGCTCCGA AGGCCCGTCA AACCAAGAGC AAAGCCCGCA TCAACGCCTA CGAACAATTG CTCAGCCAAA ATACGGAAAA AGCTCAAGGT GAATTGGAAA TTTTCATTCC ACCAGGGCCA CGCTTGGGCG ATATCGTGAT TCGTGCCAAT AATGTGAGTA AATCGTTTGG CGATAAGTTG CTTTACGAAA ACTTAACCCT CGATTTGCCT GCTGGCGGGA TTGTAGGCAT TATTGGGCCA AACGGCGCAG GTAAAACGAC CTTGTTCCGC CTGATTACCG ACCAAGAACA GCCTGATGAT GGCGTGTTTG AGGTTGGCTC AACTGTCAAA TTGGCCTATG TTGACCAAAG CCGCGAAACG CTTGACCCCG AAAAAACCGT TTGGGAAGAG ATTTCCGAAG GCGCTGAACA AATTCAGCTT GGGCCACGCA CGGTCAATTC ACGTGCCTAT GTTGCCCGTT TCAATTTCTC AGGCTCGGAT CAACAAAAGA AGGTCGGTGG CCTCTCTGGT GGCGAGCGCA ACCGCGTGCA TTTGGCCAAA ATGCTCAAAT CGGGCGCAAA CGTTATCCTG CTCGACGAAC CAACCAACGA CTTGGATGTG CATACCCTAC GAGCCTTGGA AGAGGCCTTG GAAAATTTTG GCGGCTGTGC CGTGATTATT TCCCACGATC GCTGGTTCCT TGATCGGGTT GCTACCCATA TGTTGGCCTT TGAAGGCGAT AGCCAAGTGG TTTGGTATCC TGGCACCTAC AGCGAATACG AGGCTGATCG CCGCAAACGC TTAGGCAGCG CCGCCGATCA TCCGCATCGC ATCACTTACC GCAAACTACG CCGCGATTAA
|
Protein sequence | MDNKVIYSMI RVSKIHPPNK QVLKDISLSY FYGAKIGVLG ANGSGKSSLL RILAGVDQEF QGETVLAPGY TIGYLEQEPQ LDASKTVRQI VEEAVKPVVD ALREYDEINA KFGESMSDDE MDALIQRQGE VQDKLDQMNA WDLDSRLDFA MDALRCPPSD TPVEVLSGGE RRRVALCRLL LEEPSILLLD EPTNHLDAES VAWLEKHLQE YPGTVIAVTH DRHFLNNVAG WILELDRGQG IPWKGNYSSW LEQKQQRLAN EEKAESQRQK TLQRELDWIN MAPKARQTKS KARINAYEQL LSQNTEKAQG ELEIFIPPGP RLGDIVIRAN NVSKSFGDKL LYENLTLDLP AGGIVGIIGP NGAGKTTLFR LITDQEQPDD GVFEVGSTVK LAYVDQSRET LDPEKTVWEE ISEGAEQIQL GPRTVNSRAY VARFNFSGSD QQKKVGGLSG GERNRVHLAK MLKSGANVIL LDEPTNDLDV HTLRALEEAL ENFGGCAVII SHDRWFLDRV ATHMLAFEGD SQVVWYPGTY SEYEADRRKR LGSAADHPHR ITYRKLRRD
|
| |