| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2988 |
|---|
| Symbol | |
|---|
| ID | 5734860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3773506 |
|---|
| End bp | 3774495 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641280132 |
|---|
| Product | terpene synthase metal-binding domain-containing protein |
|---|
| Protein accession | YP_001545754 |
|---|
| Protein GI | 159899507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAATA CAGCACACCT ACAACAATTA GCGAGAACGG TTCCAGCAAC CATTCCCAAG
TTGGAATCAC CGTTTCCTGC GCAAATCCAT CCATTGGCAG CGGAGGTTCA ACAGCAGACG
ACCAAATGGG TGCTTGAACA AGGTTTATTG AGCGAAGCGC GGCGTAAAGC TTTTCTTGAT
TACAACTATA CCTTGTTGAT TGCCCGTTGT TATCCGTATG CGAGTGTTGA GCGGCTGCAA
ATTATCAGCG ATTGGAATGC TTGGCTGTTT GAACTTGATG ATCAATGTGA CGAAGCGCGA
ATTGGCCATG ACCCTCAAGC GTTGGCTCGC TTGCATCAGC GGCTTGGGGC AGTTATTCGC
GGAGCCACGG TTGCTGCCGA CGAACCACTA TTAGTTACAG CCCTCGCTGA TATTATGGGT
CGGATGCGGG CGCTAGCACC ACTGGCATGG TTTGAGGTTT TTACCCAACA GGTTGACGAT
TATTTTATTG GCAATCAATG GGAAGCCCAC AATCGGCTGT ACTCGATTAT TCCCAGCGAA
ATTGAATACT TGCACTATCG TAAATTTACT AGTGCTGTTG CGATCTATAT TGCGTTTATT
GAATTTATGA ATGCAAGTTA TTTAACCGCT GATGAACGTC AATCAATCGA CTTACGCAAT
CTACAAAATT GGACGAACCT TGTACTGAGT TTATGTAATG ATCTTGTTTC AGTTAAAAAA
GAATTACGTC AAGGCGATTG GCATAATTAT GGAGCAATTG TTGCATTAAA ACGAGGTATG
AGTATTCCTG AAGCCTTAGA AATAGTCGCC AATGAGCATA ATCATTGTAT TCAACAATTT
ATAACAACTA CCACTCAACT GAAAAATTGT AGCGTGGCAC TTCAAAAAGT ATTAAACGGT
ATGATGACAT TGATGCGCGG AAATTATGAT TGGTCGGATA TTACTAGCCG TTATGCTACT
AAACTTACCG AATTGTCGTA TGCTGCATGA
|
|---|
| Protein sequence | MPNTAHLQQL ARTVPATIPK LESPFPAQIH PLAAEVQQQT TKWVLEQGLL SEARRKAFLD
YNYTLLIARC YPYASVERLQ IISDWNAWLF ELDDQCDEAR IGHDPQALAR LHQRLGAVIR
GATVAADEPL LVTALADIMG RMRALAPLAW FEVFTQQVDD YFIGNQWEAH NRLYSIIPSE
IEYLHYRKFT SAVAIYIAFI EFMNASYLTA DERQSIDLRN LQNWTNLVLS LCNDLVSVKK
ELRQGDWHNY GAIVALKRGM SIPEALEIVA NEHNHCIQQF ITTTTQLKNC SVALQKVLNG
MMTLMRGNYD WSDITSRYAT KLTELSYAA
|
|---|
| |