Gene Haur_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2975 
Symbol 
ID5734847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3753211 
End bp3753861 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID641280119 
ProductSNARE associated Golgi protein 
Protein accessionYP_001545741 
Protein GI159899494 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0123855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA TAATGGACAA AGTTCAAGCA ATTATTACTG CGATTATTAC GGCGTTAAGC 
TACCCCGGCA TTGCGTTGGT GATGTTTGCC GAAAATCTCT TCCCCCCGAT CCCTTCAGAA 
TTGGTGATGC CATTTGCTGG TTTTATCGTT GGCAAAGGTG AGATGAACCT TGTTGCAGTG 
TTGTTGGCTG GCACAATTGG CGCAGTGTTG GGTGCGCTGG CGCTCTATTA TATTGGTATG 
TGGGCCGACG AAACGATTAT TCGGCGCTTT ATCCGCCGCT ATGGCAAATT CTTCTTTATC 
AGCGAAGCTG ATATTGATAA AACCTTGGGC TTCTTTGCTA AATATGGTGA AATCGTGGTA 
TTTACTGGCC GCTTGATTCC CTTGGTACGT AGTTTAATTT CAATTCCGGC AGGCATGAAT 
CGTATGCCCA TGGGGCGCTT TTTGCTCTGG ACAACCTTTG GCTCGTTGAT CTGGAATGGT 
CTTTTGACCT ATGCAGGGAT TGTGCTTGGT TCGCAATGGG AAAATGTGCT TGGCTTAGTT 
GATCGCTATG AAAAAGTTGC CTTGGGGATT ATCGCTTTGG GCCTGATTTG GTTTGTGGTA 
AACCGCATGC TCAAAGTTCG CCGCAACCGC GCCGCATCTA AGCAGGTCTA G
 
Protein sequence
MSEIMDKVQA IITAIITALS YPGIALVMFA ENLFPPIPSE LVMPFAGFIV GKGEMNLVAV 
LLAGTIGAVL GALALYYIGM WADETIIRRF IRRYGKFFFI SEADIDKTLG FFAKYGEIVV 
FTGRLIPLVR SLISIPAGMN RMPMGRFLLW TTFGSLIWNG LLTYAGIVLG SQWENVLGLV 
DRYEKVALGI IALGLIWFVV NRMLKVRRNR AASKQV