Gene Haur_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2961 
Symbol 
ID5734833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3736279 
End bp3736827 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID641280105 
Productexonuclease-like protein 
Protein accessionYP_001545727 
Protein GI159899480 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0548295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAT ATCTTGATAT TGAAACAACC TGGCAGCGCA CGATTAGCGT GATTGGGATT 
TACTTGCCCC GGCGTGGTAC AGTTCAACTG GTTGGCGCTG GGGTTAGTGA TGTTAATTTG 
TATGCGGCCT TGGCAGGAGT CGAAACGATC TATACCTTTA ATGGTGCAAG TTTTGATCTG 
CCGATTATTT ACAAAGCCTT GGGTGCAGAT TTGAAGCGCG AGTTTGAGCA TTGCGATTTG 
TTGCGCGAAT GTCGGCGGCA AAATCTGCGC GGTGGCTTGA AAGTTGTTGA ACAAAAGATC 
GGAATTGCCC GTTCTACTCA TGGGCTTGAT GGTCGTGATG CCTTGCGTTT GTGGCAAGCC 
TACGAAAACT ATAACGATCA AAACGCTTTA GATTTATTAT TACGCTACAA TCGCGACGAT 
ATTATTCATT TGCCACGTTT GCGTTGTTAC TTACATAAAC TAGCTGAGCC TGATTTGCAC 
CCGCATGTTA CGATTTGGCA TGCGTCTGAG CAATCGTTGC TGTCGCCATT GAGCGACGAG 
GAGTATTAG
 
Protein sequence
MDAYLDIETT WQRTISVIGI YLPRRGTVQL VGAGVSDVNL YAALAGVETI YTFNGASFDL 
PIIYKALGAD LKREFEHCDL LRECRRQNLR GGLKVVEQKI GIARSTHGLD GRDALRLWQA 
YENYNDQNAL DLLLRYNRDD IIHLPRLRCY LHKLAEPDLH PHVTIWHASE QSLLSPLSDE 
EY