Gene Haur_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2931 
Symbol 
ID5734803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3706287 
End bp3707303 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID641280075 
Productanti-sigma-factor antagonist 
Protein accessionYP_001545697 
Protein GI159899450 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.353591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCTG CGCCCCAAAT TGCGCTCCAA ACATTTTTGA ATATTCCTAG CTCGCAAACC 
CTTAGCCCAA GCCAAACCCT CGAACTTCAG ATGAACCCCA CCACCGCGCC AGCATTAGCC
AGTGTGCTTG AGCGAATGCA GAATAACCAA AGCGGCATTC AAACGCTCCA GGCGAACAAT
CAAGAACTAG TGGTAGCCAA CGCTGCACTC ACCTCGATCA ATTGGCATAT TGTGGTGGTT
GCGCCTAAAA CCGAGATCAC CAGTGAAGCC CAAGCGGTCA CCGCCACAAT CGAAACCAGT
TCAGGCCGAA TTGTTGGCAA ACTGCTGTGG TTTTTGGCAG CCTTGACTAT TATCACCCTG
CTAGCGACTT GGTTGATCAG CAATCGGCTG AGTCAGCCAA TCGTGGCGTT GGTGCAAAAT
ACCCAAGCCT TAGCCGAATC GAATCAGTTT GTGCAGTTGC CCGAGCAAAG CAACGATGAG
CTAGGATTTT TGGCTCGCGC CTTCAATCAA ATGGCTAGTA AAGTTCAGTC AGCGCAACAA
AGTCTCCAAC AAGTCAATCA AAATCTTGAG CAAACCGTGC AGCAACGCAC CCATGAGCTA
GAACAAGAGC GCGAATCGTT GCAACAAACC CTTGATCAAC TCCAACAGGC CAATAGTACA
GTGGCCAAAC TGACCGCGCC AATTATTCCG GTGGCCCAAG GCGTGGTGGT TGTACCAATT
ACTGGTAGCC TGAATACCGA GCGAATCGAG CAATTGCAAC AAGCCATGTT GCGCACTGCT
GAGCGCCTAC GGATTCATAC CGTAATTCTC GATGTGACCG GACTTGAAGT TTTGGAAGAT
TCTGCGACCT TTGTCCGCAG CCTTGATGCC TTGCGCTTGC TTGGTTCAAA AGCAATGTTG
GTTGGGGTAA GTGCCGATTT TGCCCAAGAT TTGATTCAGA GCGGCATCAA TCTTGATTCA
GTTACGACCA TGGCCAATCT TCAAGCAGCT GTCCGAGCAA CATTAAATCA AGCCTAG
 
Protein sequence
MIAAPQIALQ TFLNIPSSQT LSPSQTLELQ MNPTTAPALA SVLERMQNNQ SGIQTLQANN 
QELVVANAAL TSINWHIVVV APKTEITSEA QAVTATIETS SGRIVGKLLW FLAALTIITL
LATWLISNRL SQPIVALVQN TQALAESNQF VQLPEQSNDE LGFLARAFNQ MASKVQSAQQ
SLQQVNQNLE QTVQQRTHEL EQERESLQQT LDQLQQANST VAKLTAPIIP VAQGVVVVPI
TGSLNTERIE QLQQAMLRTA ERLRIHTVIL DVTGLEVLED SATFVRSLDA LRLLGSKAML
VGVSADFAQD LIQSGINLDS VTTMANLQAA VRATLNQA