| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2919 |
|---|
| Symbol | |
|---|
| ID | 5734790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3692913 |
|---|
| End bp | 3693626 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280062 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001545685 |
|---|
| Protein GI | 159899438 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATG GCTGGGCCAT CGTCACGGGC GGCGCTCGGC GCTTGGGCAA ATCAATTGCG
CTGGAATTAG CCCGCGCTGG CTACAATTTA ATTATTCACT ACAATGCGGC TCAGGCTGAG
GCCGAACAAA CCTGTAGCGA GATTCAGGCA CTTGGGCGTG AGGCATGGGC TTATAGCGCC
GATCTGCGCG ATGTGGCTGC AATTGAGACA ATGTTTCAAA TAATTGGCGA ACGTTGTGGC
AAATTGGCAG TTTTGGTCAA TAGTGCTGCC GATTTTCCGC GCACACCGAT TGGTAGCGTG
AGCCAGCAAA CCTGGGACGA TTTGGTTGCG CTCAATCAAC GTGCCCCGTT TTTTTGTGCT
CAGGCTGCCG CCAAACTCAT GCCTGACCAT GGGGTGATTG TGAATATTGT TGATGTTGGT
GGCGAAGTGC CATGGCCTAG TTTTGTGCCT TATGGCATGA CCAAAGCTGC ATTAATCATG
ATGACCCGTG GTTTAGCATT AGCTTTGGCT CCTACTATTC GGGTTGGGGC AGTTGGGCCA
GGCGTAGCAC TTTTGCCTGA TGGTTGGCAA GAAGACCACA ATTCATTAAA CAAAATTCCC
TTGAAACGGC TGGGCGTGCC CGAAGATATC GCCAAAGCTG TGCGTTTTAT CGTCGAATCG
CCCTATTTTA CCGGCGAAAC CATCTTTGTT GATGGCGGTC GTCGCTGGGC CTAA
|
|---|
| Protein sequence | MNHGWAIVTG GARRLGKSIA LELARAGYNL IIHYNAAQAE AEQTCSEIQA LGREAWAYSA
DLRDVAAIET MFQIIGERCG KLAVLVNSAA DFPRTPIGSV SQQTWDDLVA LNQRAPFFCA
QAAAKLMPDH GVIVNIVDVG GEVPWPSFVP YGMTKAALIM MTRGLALALA PTIRVGAVGP
GVALLPDGWQ EDHNSLNKIP LKRLGVPEDI AKAVRFIVES PYFTGETIFV DGGRRWA
|
|---|
| |