| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2903 |
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| Symbol | |
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| ID | 5734774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3672045 |
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| End bp | 3673016 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641280046 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001545669 |
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| Protein GI | 159899422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0413037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCAA CGGCCAATTT AACCACGATT CAGGTGGGCG AAGCAGAAGC AGGCCAACGT
TTAGATCGGC TTGTTTCTGC CAATATGCCA GATTTATCAC GCACATATGT TCAACAATTA
ATTACCGATT TACATATTCG GGTCAATGGG CGCGGCGCAA AAGCCAGTTT GCCGGTGCAA
ATTGGCGATC AGATTGAGAT CTTTCTGCCG CTGGCAAAGC CGACCGATAT CGTGGCCGAA
GATTTGCCGC TTGATGTGAT CTATGAAGAT GCCGATGTGC TGTTGGTCAA TAAGGCCGCA
GGCATGGTTG TGCATCCTGC GCCTGGCCAT ACAACTGGCA CATTAGTCAA TGCCTTGCTC
TATCGCTATC CGCATTTGAC CACTAGCGGC GATTTGCGAC CGGGCATCGT GCATCGCTTG
GATAAAGAAA CCTCAGGTTT ATTGGTGATT GCCAAGCATG ATCAAGCACG CATGATGCTA
ACTGAGCAAC AGATGGCGCG GCGCATGCAT AAAAAATATC TCGCGCTGGT CGAAGGCCAT
TGGCGAGAGC CAACCGGCAC AATCGATGCG CCAATTGGCC GCAACCCCAA TAACCGTTTG
CGCATGATGG TGATGCCCGA AGGGCGTTAT GCGGTTACTC ATTATCAAGT GCTAGAGGTG
CTTGGCCCCT ATTCGTTGGT TCGCGCAACC CTCGAAACAG GCCGCACCCA TCAAATTCGG
GTGCATTTTT CCTATCGCAA TCGGCCAATT TTAAATGATG CGCTATATGG TCATCGTAAG
CCCAAAGAAA CCTTTGGCAT CGAACGCCAC TTTTTGCATG CCTATCATTT GGGCTTTCGC
CTGCCAAGCA CTGGCGAATG GTGCTCGTGG GAAGTACCGC TACCAGCCGA ATTAGAGAAA
ATTCTGACGA CCTTGCGCAC CCGCTATGAA ACAATTGTCT ATCCCGACCC ATTGATTGAA
GCCGTTTCAT GA
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| Protein sequence | MEPTANLTTI QVGEAEAGQR LDRLVSANMP DLSRTYVQQL ITDLHIRVNG RGAKASLPVQ
IGDQIEIFLP LAKPTDIVAE DLPLDVIYED ADVLLVNKAA GMVVHPAPGH TTGTLVNALL
YRYPHLTTSG DLRPGIVHRL DKETSGLLVI AKHDQARMML TEQQMARRMH KKYLALVEGH
WREPTGTIDA PIGRNPNNRL RMMVMPEGRY AVTHYQVLEV LGPYSLVRAT LETGRTHQIR
VHFSYRNRPI LNDALYGHRK PKETFGIERH FLHAYHLGFR LPSTGEWCSW EVPLPAELEK
ILTTLRTRYE TIVYPDPLIE AVS
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