Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2883 |
Symbol | |
ID | 5734754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3655155 |
End bp | 3656201 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641280026 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001545649 |
Protein GI | 159899402 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0186538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGTC AAAAAGTGCT CGTAACAGGC GGCGCAGGCT TCCTTGGAAT TAACCTTTTG CGCTACCTTG ATGCCAAAGG CTACGACTTA GTTTCCTATG ATTTTGCCGA TTGGACCTAT ACCGATCTCA AAGATCATAT CACGATTGTT AAAGACGATA TTCGCAACGT TGCTGGGCTT GATCGGGCCA TGCAAGGTGT TGATTTCGTT GTGCATACTG CTGCGGCTTT GCCTCTCTAT CCAGCCGAAG ATATTTTTTC GACCGATATT GATGGCACGC GCAATGTGCT GGAAGTTGCC AAAAAACATG GCGTAAAACG GGTGGTTCAC ATCTCGTCAA CCGCAGTTTA TGGCATTCCC GATCACCATC CTTTGGTGGA AAACGACCGC TTGGATGGGG TTGGGCCATA TGGCAAAGCC AAAGTGATGG CCGAATATGT GGCCTTGGAA TATCGCGCCA AAGGCATGGA AGTGCCAATT ATTCGTCCAA AATCGTTTAT CGGGCCAGAA CGGCTCGGTG TTTTCGCCTT GCTCTACGAT TGGGCGATCG ACGGCCACAA CTTCCCAATG ATTGGCAATG GCAAAAATCG CTATCAATTG CTTGATGTAG AAGATCTCTG CGATGCGATT TATCTATCGA TGACCTTGCC TGCTGAAGTT GCTAACGATA CTTTCAATAT GGGTGCAAAA GAATTCGCCA CCATGAAGGA AGATTATCAA GCAGTACTTG ATTACGCTGG CCATGGCAAA AAGATCATCG GTTCGCCAGC AACCCCAGCC ATTTGGACGC TGCGAGCCTT GGAATTTTTG CGGGTTTCGC CGCTCTACAA GTGGGTTTAT GAAACGGCCT CGAAAGACTC ATTTGTCTCA ATCGAAAAAG CCGAAACCCA ACTTGGCTGG AAGCCCAAAT TCTCCAACCA AGATGCCTTG ATTCGCAACT TCAAGTGGTA TATCGACAAT CGTAACTCAT TTGCCAATGC TTCAGGGGTG ACCCATCGCG TGCCGTGGAA ACAAGGCGCG ATTGGTTTGC TCAAAAAAGC CTTCTAA
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Protein sequence | MTRQKVLVTG GAGFLGINLL RYLDAKGYDL VSYDFADWTY TDLKDHITIV KDDIRNVAGL DRAMQGVDFV VHTAAALPLY PAEDIFSTDI DGTRNVLEVA KKHGVKRVVH ISSTAVYGIP DHHPLVENDR LDGVGPYGKA KVMAEYVALE YRAKGMEVPI IRPKSFIGPE RLGVFALLYD WAIDGHNFPM IGNGKNRYQL LDVEDLCDAI YLSMTLPAEV ANDTFNMGAK EFATMKEDYQ AVLDYAGHGK KIIGSPATPA IWTLRALEFL RVSPLYKWVY ETASKDSFVS IEKAETQLGW KPKFSNQDAL IRNFKWYIDN RNSFANASGV THRVPWKQGA IGLLKKAF
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