Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2828 |
Symbol | |
ID | 5734709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3595193 |
End bp | 3596839 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641279971 |
Product | trehalose synthase |
Protein accession | YP_001545594 |
Protein GI | 159899347 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACG ATTGGTATAA AGATGCAATC TTTTACGAAT TGCATGTACG AGCTTTTCAG GATAGCAATG GCGATGGCAA TGGCGATTTC CGTGGCTTGA TTTCGCGCTT GGATTATTTA CAAAGTTTAG GCGTTGATTG TTTATGGTTA TTACCTTTTT ATCCATCGCC TGGCAAAGAT GATGGCTATG ATGTTGCAGA TTATTGTAAT GTGCATCCTA GTTATGGCAC GATGGAAGAT GTGGTTACAT TTTTCGAGGC AGCCCATTCA CGTGGCTTGC GGGTAATGAT TGACCTTGTA GTTAATCACA CCTCGGATCA GCACCCATGG TTTCAAGCGG CACGCCAACC AGACTCGCCC TATCGCGATT ATTATGTTTG GAGTGATACA AATCAGCGTT ACCGCGATGC ACGAATTATT TTCACCGATA CCGAACGCTC GAATTGGGCT TGGGATGAAG TTTCCGAATC GTATTACTGG CATCGTTTCT TCAGTCATCA ACCTGATTTG AATTATGAAA ATCCCGCAGT CTTGGAAGAA ATGTACAATA TTATGCGTTT TTGGCTCGAT CGCGGGGTTG ATGGGTTCAG AGTTGATGCA GTGCCTTACT TAATCGAACG TGAGGGCACA AATTGCGAAA ATTTGCCTGA AACTCATGTA ATTTTGCGTA AAATGCGTGA ATTTGTTGAT CAACACTATC CACATTGTGT ACTGCTGGCT GAGGCCAACC AATGGCCCGA TGATGTGCGC CATTATTTCG GCAACGATGA TGAATTTCAT ATGGCCTTTA ATTTTCCAGT GATGCCACGC ATGTTTATGG CTGTACGCAA GGAAGATAGT ACGCCAATTA TCGATATTGT ACGCCAAACG CCTAAAATTC CTGAAAACTG CCAATGGGCA ACTTTTCTGC GCAATCACGA TGAATTAACT CTCGAAATGG TCACTGATGA AGAACGTGAT TATATGTATC GTGAATATGC GGCTGATCCA CGCATGAAAA TCAATATTGG GATTCGACGA CGTTTAGCAC CCTTGATGGA TAATGCACGT CGTCGTATGG AATTGATGAA TAGCATGCTG TTGAGTTTGC CAGGCTCGCC AATTATTTAT TATGGCGATG AAATTGGCAT GGGCGATAAT ATTTATCTTG GCGACCGCAA CGGCGTGCGT ACTCCGATGC AATGGAATGG CGACCGCAAT GCTGGTTTTT CGGCTGCCGA TTTTGCCCGT TTGTATAGCC CTGTGATTAT TGATCCGGTT TATGGCTATC AAGCGATCAA TGTTGAGGCG CAGGAGCGCG TGCAATCATC ATTATTAAAT TGGATGAAGC GCTTAATTCG GGTGCGCAAG CGTTATTCAG TCTTTGGGCG TGGCGATATT CAAATTCTCG AAACGCAAAA TCGCAAAGTT TTAGCCTATT TGCGCAGTTA CGCCGACCAA ACGGTGCTGA TTGTCAATAA TCTTTCGCGC TTTATCCAGC CAGTTGAGCT GGATTTGGCT GAGTTTGCGG GCATGCGCTT GGTGGAATTA ATTGGTGAAA CGCCATTTCC GGCAATTGCG ACGACACCTT ATTTTCTGTC GCTAGCGCCG CATGGCTTTA TCTGGTTCCG AATCGAAGGA GTGCGCCTTG CTCTCGACGA CGCTTAA
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Protein sequence | MQNDWYKDAI FYELHVRAFQ DSNGDGNGDF RGLISRLDYL QSLGVDCLWL LPFYPSPGKD DGYDVADYCN VHPSYGTMED VVTFFEAAHS RGLRVMIDLV VNHTSDQHPW FQAARQPDSP YRDYYVWSDT NQRYRDARII FTDTERSNWA WDEVSESYYW HRFFSHQPDL NYENPAVLEE MYNIMRFWLD RGVDGFRVDA VPYLIEREGT NCENLPETHV ILRKMREFVD QHYPHCVLLA EANQWPDDVR HYFGNDDEFH MAFNFPVMPR MFMAVRKEDS TPIIDIVRQT PKIPENCQWA TFLRNHDELT LEMVTDEERD YMYREYAADP RMKINIGIRR RLAPLMDNAR RRMELMNSML LSLPGSPIIY YGDEIGMGDN IYLGDRNGVR TPMQWNGDRN AGFSAADFAR LYSPVIIDPV YGYQAINVEA QERVQSSLLN WMKRLIRVRK RYSVFGRGDI QILETQNRKV LAYLRSYADQ TVLIVNNLSR FIQPVELDLA EFAGMRLVEL IGETPFPAIA TTPYFLSLAP HGFIWFRIEG VRLALDDA
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