Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2827 |
Symbol | |
ID | 5734708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3594397 |
End bp | 3595158 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641279970 |
Product | HAD family hydrolase |
Protein accession | YP_001545593 |
Protein GI | 159899346 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0316948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGATTAA TCACCGATAT TGATGGTACG ATCAGTCGAA TTGCACCAAC GCCTGATGGT GCAACCGTTG ATCCTTTATG TCGGGCCGCT TTGAGCCAAT TGACTGAGCA TTTACCCCTC GTTGCCGCAG TTTCTGGTCG TGCCGCCCGC GATGTGCAAC GTATGCTGCA ACTGCCAGCG ATGCGCTACA TCGGCAACCA TGGCTTGGAA ATCTGGGGCC AAGATGGTGG GGTACTCGTG CCCGCTGCGC AACCATATAG CGCCGCCGTG CGCGAATTTG TGGCAGCGAT GCAGCGCTAC GAGCTACCTG AAGGCGTTGT GCTTGAATCC AAGGGCATCA CGGCCACCTT ACATTATCGC TTGGCGACTG ATCAAACGGC GGCTGAGCTT TGGCTGCGCA AGGTTTTGAG CGAACTAGCC GCCGCCCACA ATTTGATCAT CACCGAAGGG TTGATGATTT TCGAGGTGCG CCCACCCGTT GATTGGCATA AGGGCAGCGC GGTAGCCTGG CTGATCGAGG ATCACAAGCT TGAGGCAGCC ATCTTTTTGG GCGACGATCT GACCGATGTC GATGGCTTTC GCTCGATTGC GGCAGCGCGT GAACGCGGTT GCCAAGCCTT GGCGATCGGT GTGATCAATC CCGAATCGCA TCCATCGGTG GCCGAAACTG CCGATATCTT GATCAACGGC GTTGATGCAA GTGCTGAAGT TTTACAATGG ATTCTTGCAC AGCGGTTGAG CGATAGCCAT GGCGTTGATT AG
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Protein sequence | MGLITDIDGT ISRIAPTPDG ATVDPLCRAA LSQLTEHLPL VAAVSGRAAR DVQRMLQLPA MRYIGNHGLE IWGQDGGVLV PAAQPYSAAV REFVAAMQRY ELPEGVVLES KGITATLHYR LATDQTAAEL WLRKVLSELA AAHNLIITEG LMIFEVRPPV DWHKGSAVAW LIEDHKLEAA IFLGDDLTDV DGFRSIAAAR ERGCQALAIG VINPESHPSV AETADILING VDASAEVLQW ILAQRLSDSH GVD
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