Gene Haur_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2827 
Symbol 
ID5734708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3594397 
End bp3595158 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID641279970 
ProductHAD family hydrolase 
Protein accessionYP_001545593 
Protein GI159899346 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0316948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGATTAA TCACCGATAT TGATGGTACG ATCAGTCGAA TTGCACCAAC GCCTGATGGT 
GCAACCGTTG ATCCTTTATG TCGGGCCGCT TTGAGCCAAT TGACTGAGCA TTTACCCCTC
GTTGCCGCAG TTTCTGGTCG TGCCGCCCGC GATGTGCAAC GTATGCTGCA ACTGCCAGCG
ATGCGCTACA TCGGCAACCA TGGCTTGGAA ATCTGGGGCC AAGATGGTGG GGTACTCGTG
CCCGCTGCGC AACCATATAG CGCCGCCGTG CGCGAATTTG TGGCAGCGAT GCAGCGCTAC
GAGCTACCTG AAGGCGTTGT GCTTGAATCC AAGGGCATCA CGGCCACCTT ACATTATCGC
TTGGCGACTG ATCAAACGGC GGCTGAGCTT TGGCTGCGCA AGGTTTTGAG CGAACTAGCC
GCCGCCCACA ATTTGATCAT CACCGAAGGG TTGATGATTT TCGAGGTGCG CCCACCCGTT
GATTGGCATA AGGGCAGCGC GGTAGCCTGG CTGATCGAGG ATCACAAGCT TGAGGCAGCC
ATCTTTTTGG GCGACGATCT GACCGATGTC GATGGCTTTC GCTCGATTGC GGCAGCGCGT
GAACGCGGTT GCCAAGCCTT GGCGATCGGT GTGATCAATC CCGAATCGCA TCCATCGGTG
GCCGAAACTG CCGATATCTT GATCAACGGC GTTGATGCAA GTGCTGAAGT TTTACAATGG
ATTCTTGCAC AGCGGTTGAG CGATAGCCAT GGCGTTGATT AG
 
Protein sequence
MGLITDIDGT ISRIAPTPDG ATVDPLCRAA LSQLTEHLPL VAAVSGRAAR DVQRMLQLPA 
MRYIGNHGLE IWGQDGGVLV PAAQPYSAAV REFVAAMQRY ELPEGVVLES KGITATLHYR
LATDQTAAEL WLRKVLSELA AAHNLIITEG LMIFEVRPPV DWHKGSAVAW LIEDHKLEAA
IFLGDDLTDV DGFRSIAAAR ERGCQALAIG VINPESHPSV AETADILING VDASAEVLQW
ILAQRLSDSH GVD