| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2794 |
|---|
| Symbol | |
|---|
| ID | 5734675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3552345 |
|---|
| End bp | 3553634 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641279937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001545560 |
|---|
| Protein GI | 159899313 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACAA TTGCAGTAAT TGGGGCGGGC TTTGCTGGAT TAAGCGCCGC CTATGATTTG
GCTTGTGCTG GTCACCAGGT CACGGTTTAT GAGGCTGCGC CCCAAGTTGG TGGTTTAGCG
GCGGGCTTTC AGGCTGAAGG CTGGGATTGG TCGCTGGAAA AGTTCTATCA TCATATTTTT
GGCTCGGATA AGGCGCTGCT AGATTTTATT AAAGAAATTC GCGCCGATGA TTTGCTCTTT
TTCAATAGCC CAGTTTCTGG TCAATGGGAT GCTCAGCGTG GCTCAATTGA AATTGGTGGG
ATCATTCCGC TCTTGACCTA TCCCCACCTT TCAGTCTTCA ACCGTTTGCG GAATGCTGCT
GGCGGGGCTT GGCTTAAATT TTTGGCGATT ATCGATCGCT GGCAACACCT CGAAAAGACC
ACTGCCGAGC GCTACATTCA AAAGCTGATG GGTAAACCGG CCTACGAAGC CATGTGGAAA
CCTGTGCTTG AAGGCAAATT TGGGCCATAC ACGCCCGAAG TTAATGCTGC TTGGTTTTGG
GCACGGATCG CCTCGCGGAC TTTCAAACTT GGCTATTTTC GTGGCGGCTT CCAAGCCTTG
GGCGAACGCA TGGCCGAGGC GGTGCGCCAA AAGGGCGGCA CAATTCGGCT CAACAGTCCA
GTTCAAGAGC TGCGTAAAAT TGAGCAAGGC TGGCTGGTGA TCAGCAACGA TCAAGCGAGT
TATGATCAAG TGCTTTCGAC CACTTCGCCT GGTTTGCTCA AGCGCATGAC CCCCGATCTG
CCAGCCAGCT ACACCGCCAA ACTTGATCAA CTCAAATCGA TTGGGGCGGT GGTGTTAACG
GTGGCGCTCA AACAATCGCT GACCAACGGC ATGTATTGGA TGAACATGGA CAAAAAGCAT
TTTCCCTTTT TGGCCTTGGT TGAGCATACC CAGATGATCG ATCGTCGTCA TTATGGCGGC
CAGCATTTGG TCTATCTTGG CGATTATCTG GAGCCATCGC ACGAGTATTT TCAATTGAGC
AAAGAAGAAC TCCTCGAACG CTTTATGCCT TCGCTAAGCA AAGTTAATCC TCAATTCAAG
CCCGATTGGA TCGAGGGCGT GTGGTTGCAT CGCGAAGCCT ATGCTCAGCC AATTGTGCCA
GTCAACCATA GCCAAGCGAT TCCAGCCTTG AAAACGCCGC TCGAAGATTT ATGGTGGGCG
AGTATGAGCC AAGTCTACCC ATGGGATCGC GGCACGAATT TCGCGGTGGA AATTGGCCGT
CGCGCCGCCA AAGAGATGTT GTCTAAATAG
|
|---|
| Protein sequence | MKTIAVIGAG FAGLSAAYDL ACAGHQVTVY EAAPQVGGLA AGFQAEGWDW SLEKFYHHIF
GSDKALLDFI KEIRADDLLF FNSPVSGQWD AQRGSIEIGG IIPLLTYPHL SVFNRLRNAA
GGAWLKFLAI IDRWQHLEKT TAERYIQKLM GKPAYEAMWK PVLEGKFGPY TPEVNAAWFW
ARIASRTFKL GYFRGGFQAL GERMAEAVRQ KGGTIRLNSP VQELRKIEQG WLVISNDQAS
YDQVLSTTSP GLLKRMTPDL PASYTAKLDQ LKSIGAVVLT VALKQSLTNG MYWMNMDKKH
FPFLALVEHT QMIDRRHYGG QHLVYLGDYL EPSHEYFQLS KEELLERFMP SLSKVNPQFK
PDWIEGVWLH REAYAQPIVP VNHSQAIPAL KTPLEDLWWA SMSQVYPWDR GTNFAVEIGR
RAAKEMLSK
|
|---|
| |