| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2789 |
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| Symbol | |
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| ID | 5734670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3546761 |
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| End bp | 3547753 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641279932 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001545555 |
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| Protein GI | 159899308 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCC GTTTTTCACT TGGTTGGCAA CGCTTGGCCT TGGCTTTAAT CGTCGGGCTT
TTGGCAAGCT GTGGCTCCAC CAGCAATGAT GCTGCTTCAG ATGGACAAAC GAGCACGCGC
ACCCTGCGGA TCGGCTATCA AAAGGGTGGC TCGTTGCCGA TTCTCAAGGG CAACGGCGCT
CTTGAGAGTC GGCTCAAGGA TGTCAAGGTT GAATGGATTG AGTTTGCCGC AGGGCCGCCG
CTGCTTGAAT CACTGAATGC AGGCAGCATC GATCTTGGCT CGACTGGCCA AACTCCGCCA
ATTTTTGCCC AAGCTGCTGG CACGCCGCTG GTTTATGTGG CCTCGGTCGC GGCTTCGCCT
ACCGGCCAAG CCTTGCTCGT ACCGAAAGAT TCACCAATTC AAAGCGTGAG CGAGCTCAAG
GGCAAAAAAG TTGCCTTTGC CAAAGGTTCG AGCGCCCATT ATTTTGCAAT TGATGTTCTG
CGTGAAGCAG GCTTGCAATA TAGCGATATT GAGCCAGCAT TTCTGACTCC ACCCGATGCG
CGGCCAGCGT TCGAGGGTGG CAGCGTCGAT GCTTGGATTA TTTGGGAACC CTATTTGACG
ATTGCGCTCA AAGCAACCGA TGCGCGAGTT GTGCACGATG GATCGAGCCT TGCGCCCAGC
CATAGCTACT ATTTAGCAGC CAAAAGCTTT GCCGAGCAAC ATCCCGATCT GGTCAGCGCA
ACCTTGGAAG AAATTCAAAA AGTTGAGCAA TGGTCAGCCC AAGAACCGCA AGCAGTTGCC
AAAATTCTAG CTCCCGTGAT TGGGGTTGAT GCGGCAATCT TAGAAGAAGT GGCCAAAAAA
CAGGCCTTTG GGCTTAGCCC AATCAATGAC GCAATTGTGA ATGAGCAACA GCAAATTGCC
GATACCTTTT TTGAATTAGG CTTAATTCCC AAAAAGGTCA GCATTCGCGA AGCAGTTTGG
ACGTGGCAAC CAACCCAAGC CAGCGCTCAG TAG
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| Protein sequence | MARRFSLGWQ RLALALIVGL LASCGSTSND AASDGQTSTR TLRIGYQKGG SLPILKGNGA
LESRLKDVKV EWIEFAAGPP LLESLNAGSI DLGSTGQTPP IFAQAAGTPL VYVASVAASP
TGQALLVPKD SPIQSVSELK GKKVAFAKGS SAHYFAIDVL REAGLQYSDI EPAFLTPPDA
RPAFEGGSVD AWIIWEPYLT IALKATDARV VHDGSSLAPS HSYYLAAKSF AEQHPDLVSA
TLEEIQKVEQ WSAQEPQAVA KILAPVIGVD AAILEEVAKK QAFGLSPIND AIVNEQQQIA
DTFFELGLIP KKVSIREAVW TWQPTQASAQ
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