| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2771 |
|---|
| Symbol | |
|---|
| ID | 5734652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3528808 |
|---|
| End bp | 3529911 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641279914 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001545537 |
|---|
| Protein GI | 159899290 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAC CATCTTTCCC AGCTTTTTGC AATCGTTGTG GCAACCGGCG GAGTCCTCAA
GCGCGGTTTT GCAGATACTG TGGTAATGCC TTTCAGCATT GGCAGGCCAC AGCAACCAAG
TCGATCCCTT CAACTGAGGT AGGCGTAAAG GCTGTGCAGC GTAGCATAAA ATGGCGTTAT
TGGTTTGCGT TAACGCTTGT TTTATTCATT GGTGCACGAC TTAGCCTAAA ACCATTGATG
GGATTGGTAC TAGGTGGTTT AAATTTTAGC AACGCACCAA TTGCTGGTAC TCCTAACCAG
AGTCCGCCTA ATCAACGCCT TGCCACAGGC CAAACGCTCC GAATTCACGT GATCGATGTT
GATCAGGGGG ACAGTATCTT AATTCAAACT CCACAGGGGA TGAACGCCTT AATTGACGGC
GGCTATGACA ATGGTTTGGC ATTAGAATAC TTACACCAAC AAGGCATTCA ACGAATCGAT
CATATGATCG TATCACACCC TCATGCTGAT CATATTGGCG GGCTGGTTGA GGTGCTGAAT
TCTCTCGAAG TTGGCAGTAT TTGGACATCG GGTGCAGTTC ACTCCACCAG TTATTTTGAG
AATTTGCTTG ATGCGATTGA TCGTCAACAA GTGCCATATC GCGAAGTTAA AACCCAAGAG
TCTATTCCTC TGGGCGATTT GAGTTTATTA GTTGTCCGCA GCGAACCACA GGCTGGTGAT
TTAAATGATA CCTCCCTGAT TTTGCGTTTA GAGTATGGTC AATTTAGTAT GCTTTTTACT
GGTGATGCTG AAGCGAGTAG CGAGGTCGAT GTTTTACAAA CAACGCCCAA TTTGTTACCA
GCTACGGTGC TTAAGGTTGG CCATCATGGG TCATATACCT CAACGACTCC TGCATTTGCC
CTAGCGGTTG ATCCAACTCT AGCGATCTAT TCAGCAGGTC GTAATAATTC TTATGGCCAT
CCACATCAAC AAACATTAAC AACATTGTGC AATCTCGGGG CAACGGTTTA TGGCACTGAT
CGTCATGGGA CAGTCGTTAT AACCTCCGAT GGACTTGAGT ATCAGGTGCA AACGGCCCAG
CGAACAACAG CACTGTGTCA TTAA
|
|---|
| Protein sequence | MTAPSFPAFC NRCGNRRSPQ ARFCRYCGNA FQHWQATATK SIPSTEVGVK AVQRSIKWRY
WFALTLVLFI GARLSLKPLM GLVLGGLNFS NAPIAGTPNQ SPPNQRLATG QTLRIHVIDV
DQGDSILIQT PQGMNALIDG GYDNGLALEY LHQQGIQRID HMIVSHPHAD HIGGLVEVLN
SLEVGSIWTS GAVHSTSYFE NLLDAIDRQQ VPYREVKTQE SIPLGDLSLL VVRSEPQAGD
LNDTSLILRL EYGQFSMLFT GDAEASSEVD VLQTTPNLLP ATVLKVGHHG SYTSTTPAFA
LAVDPTLAIY SAGRNNSYGH PHQQTLTTLC NLGATVYGTD RHGTVVITSD GLEYQVQTAQ
RTTALCH
|
|---|
| |