Gene Haur_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2770 
Symbol 
ID5734651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3527026 
End bp3528660 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content51% 
IMG OID641279913 
ProductPHB depolymerase family esterase 
Protein accessionYP_001545536 
Protein GI159899289 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAG GATGGCTGAT CGTACTGCTG TTACTTGGCA TTTTGGCAAG TTTTTGGAGT 
CCACAGGCGG CGAGTGCAGG TCAATGGATT ACCGGTTCAG TTACAACGAG CGCCGGTTCG
CGCAATTACA AACTATGGGT TCCAACTAAT TATTCGACCT CAACGCCTAC CGCCTTAGTG
GTGCTGTTAC ATGGCTGTAC TCAAACGCCC GATGATTTTG CCCGTGGCAC CGAAATGAAC
AATTTGGCCG ATAACCAAAC GTTTTTGGTA CTCTACCCTG AACAACCAAC CAGCAGTAAT
GCCAATCGTT GCTGGCAATG GTGGGATAGC CAACATCAAA CACGGGGGGC AGGCGAACCC
AGCATTATCG CCGCAATGGT GACCAGCATT CAAGCGAGCT ATAACGTTGA TCCAAGTCGG
CGTTATGTTG CAGGGATTTC GGCTGGTGCA GCGATGAGCG TCATTATGGG CGCGACCTAT
CCCGATATCT TTTCAGCAAT TGGGGTTGTT GGTGGCTTGG AATACAAGGC CGCAACCAGC
GTGTTGAATG TTTCGACGGC CATGCAATCG GGTGGCCCCA ACCCCGAAGC TCAAGGCTTG
GCCGCCTATC AATCGATCGG TACGCGAGCC AATTTGGTGC GGGTGATGGT GATTCATGGA
ACGGCGGACA GCGTGGTTAC GCCGATCAAC GGCCAACAAG TTGTCCAGCA GTGGCTCACC
ACCAACGATT ATCTTGATGA TACTCAGCGC AATTATTCAG TCGATGCAAC CGTTGATCAA
ACAATTTCGG GTACTGTGCC TAACGGTCGG AGCTACACCC GCACTATCTA CAACAATGCA
ACCAACCAAC CAATTATTGA ACATTGGGCA ATTAATGGGA TGGGGCATGC ATGGTCAGGT
GGCAGCAGTT CAGGTTCCTA CACCGATCCT CAAGGCCCAA AAGCCAGCAA TGAATTTTGG
CGGTTCTTTA GCCAAACCTC GGCCAGCCCC ACCCCAACAA CTACGCCAGC AGCCAGTGCC
ACCAGCACTC CACCCAGCAT AACGCCAACA AATCCAACCT CGACCCCGAT TGCTCCTAGC
CCTACACCCA GTGCAGGCCA AAGCATGCAA TTCCCTTCGT GGGGCTTGGA AGATGGCTTG
GTTGCCCAAA CAACGTTTGG TGGATATGTA TTGATTCCAA GTATGTATGT TGGTGATAGT
GGCAGCACCA GTCTGCGCGG AATCCTCTCA TTTGACACCT CGGCCATTCC CGATGGGGCG
ACGATTACCA GCGTCAACCT AAGCTTAGCG TATGAACAAA GCGCGATTGG CACTCCGTGG
ACAGGTCTTG GAAGCTTAGT TGCAGATCTA AATCAAGGTT GTTTAAGTCT GACCTGTTAT
CTTGAATTGA GTGATTTTGG CACAACGACC ACAGCCAGCA GTGCCATGAG CTTTCAGCAA
ACCCCCAATG GTTTGAATGG TAGCGCCAAT TCAACCGGAT TAAGTGCTAT CAATAAACAA
GGCCGTACCC AAATTCGGCT GCGCTTTGAG AACTTAACCA ATGCTAACAG CCAAGCTGAT
TATGTGCGGA TTGCTGGTGG CGAAGCAATG TTGACAAGCA ATCGCCCAGT CTTGACTGTA
ACCTATCAAC CATAA
 
Protein sequence
MKRGWLIVLL LLGILASFWS PQAASAGQWI TGSVTTSAGS RNYKLWVPTN YSTSTPTALV 
VLLHGCTQTP DDFARGTEMN NLADNQTFLV LYPEQPTSSN ANRCWQWWDS QHQTRGAGEP
SIIAAMVTSI QASYNVDPSR RYVAGISAGA AMSVIMGATY PDIFSAIGVV GGLEYKAATS
VLNVSTAMQS GGPNPEAQGL AAYQSIGTRA NLVRVMVIHG TADSVVTPIN GQQVVQQWLT
TNDYLDDTQR NYSVDATVDQ TISGTVPNGR SYTRTIYNNA TNQPIIEHWA INGMGHAWSG
GSSSGSYTDP QGPKASNEFW RFFSQTSASP TPTTTPAASA TSTPPSITPT NPTSTPIAPS
PTPSAGQSMQ FPSWGLEDGL VAQTTFGGYV LIPSMYVGDS GSTSLRGILS FDTSAIPDGA
TITSVNLSLA YEQSAIGTPW TGLGSLVADL NQGCLSLTCY LELSDFGTTT TASSAMSFQQ
TPNGLNGSAN STGLSAINKQ GRTQIRLRFE NLTNANSQAD YVRIAGGEAM LTSNRPVLTV
TYQP